Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | TCP7 |
| Gene Symbol Synonym | OsTCP7, CHE, OsTCP4, TCP4 |
| CGSNL Gene Name | TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 7 |
| Gene Name Synonym | TEOSINTE-BRANCHED1CYCLODOIDEA/PCF7 |
| Protein Name | TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 7 |
| Allele | tcp4KO, tcp4KO2-7, tcp4KO4-1, tcp4KO4-6 |
| Chromosome No. | 2 |
| Explanation | a rice ortholog of Arabidopsis gene for circadian clock component. OsTCP4 in Zhang et al. 2024. TO:0000975: grain width. |
| Trait Class |
Vegetative organ - Culm
Seed - Morphological traits - Grain shape Tolerance and resistance - Stress tolerance Character as QTL - Grain quality |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK061568
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| MSU ID |
LOC_Os02g42380.1
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| RAP ID |
Os02g0635800 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Zhang H., Zhang J., Xu P., Li M., Li Y.
J. Exp. Bot. 2024 75(5) 1421-1436 Insertion of a miniature inverted-repeat transposable element into the promoter of OsTCP4 results in more tillers and a lower grain size in rice.
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Duyen D.V., Kwon Y., Kabange N.R., Lee J.Y., Lee S.M., Kang J.W., Park H., Cha J.K., Cho J.H., Shin D., Lee J.H.
Plants (Basel) 2022 11(6) Novel QTL Associated with Aerenchyma-Mediated Radial Oxygen Loss (ROL) in Rice (<i>Oryza sativa</i> L.) under Iron (II) Sulfide.
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Matsuzaki J., Kawahara Y., Izawa T.
Plant Cell 2015 27(3) 633-48 Punctual Transcriptional Regulation by the Rice Circadian Clock under Fluctuating Field Conditions.
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Mondragón-Palomino M., Trontin C.
Ann. Bot. 2011 107(9) 1533-44 High time for a roll call: gene duplication and phylogenetic relationships of TCP-like genes in monocots.
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Rita SHARMA, Meenu KAPOOR, Akhilesh K. TYAGI, Sanjay KAPOOR
J Plant Mol Biol Biotechnol 2010 1(1) 24-38 Comparative transcript profiling of TCP family genes provide insight into gene functions and diversification in rice and Arabidopsis
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
circadian rhythm( GO:0007623 )
chloroplast( GO:0009507 ) response to water deprivation( GO:0009414 ) response to cold( GO:0009409 ) response to nutrient( GO:0007584 ) regulation of transcription, DNA-dependent( GO:0006355 ) regulation of starch biosynthetic process( GO:0010581 ) |
| Trait Ontology |
drought tolerance( TO:0000276 )
cold tolerance( TO:0000303 ) nutrient sensitivity( TO:0000480 ) grain size( TO:0000397 ) tiller number( TO:0000346 ) grain thickness( TO:0000399 ) chalky endosperm( TO:0000266 ) seed length( TO:0000146 ) grain length( TO:0000734 ) grain width( TO:0000402 ) |
| Plant Ontology | - |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Feb 18, 2026 | |
