Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym Rf4, Rf-4, PPR782a, PPR9, PPR3
CGSNL Gene Name _
Gene Name Synonym restorer-of-fertility 4, fertility restorer 4, pentatricopeptide repeat (PPR)-encoding gene 782a, pentatricopeptide repeat-containing protein 782a, pentatricopeptide repeat protein 9, pentatricopeptide repeat motif containing gene 3, PPR motif-containing gene 3
Protein Name
Allele rf4, Rf4-M, rf4-j, rf4-i, PPR9-782-M, PPR9-782-N, PPR9-782-I, PPR9-782-ZH, PPR9-409-J, PPR9-409-Z, PPR9-409-93
Chromosome No. 10
Explanation LOC_Os10g35240. AB110443. AB900792. Two genes PPR683 and PPR762 were considered as candidate genes in the Rf4 locus. KJ680247-KJ680250. PPR3 in Ngangkham et al. 2010. PPR9 in Tang et al. 2014. PPR782a in Kazama and Toriyama 2014.
Trait Class Reproductive organ - Pollination, fertilization, fertility - Fertility restoration
Expression
Sequence/Locus
cDNA Accession No. -
RAP ID Os10g0495200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Fan F., Li N., Chen Y., Liu X., Sun H., Wang J., He G., Zhu Y., Li S.
Front Plant Sci 2017  8  986
Development of Elite BPH-Resistant Wide-Spectrum Restorer Lines for Three and Two Line Hybrid Rice.
Tang H., Luo D., Zhou D., Zhang Q., Tian D., Zheng X., Chen L., Liu Y.G.
Mol Plant 2014  7(9)  1497-500
The rice restorer Rf4 for wild-abortive cytoplasmic male sterility encodes a mitochondrial-localized PPR protein that functions in reduction of WA352 transcripts.
Kazama,T. and Toriyama,K.
Rice 7, 28 REMARK DOI:10.1186/s12284-014-0028-z 2014   
A fertility restorer gene, Rf4, widely used for hybrid rice breeding encodes a pentatricopeptide repeat protein
Luo D., Xu H., Liu Z., Guo J., Li H., Chen L., Fang C., Zhang Q., Bai M., Yao N., Wu H., Wu H., Ji C., Zheng H., Chen Y., Ye S., Li X., Zhao X., Li R., Liu Y.G.
Nat. Genet. 2013  45(5)  573-7
A detrimental mitochondrial-nuclear interaction causes cytoplasmic male sterility in rice.
Ma H.
Nat. Genet. 2013  45(5)  472-3
A battle between genomes in plant male fertility.
Balaji Suresh P., Srikanth B., Hemanth Kishore V., Subhakara Rao I., Vemireddy L.R., Dharika N., Sundaram R.M., Ramesha M.S., Sambasiva Rao K.R.S., Viraktamath B.C., Neeraja C.N.
Euphytica 2012  187  421-435
Fine mapping of Rf3 and Rf4 fertility restorer loci of WA-CMS of rice (Oryza sativa L.) and validation of the developed marker system for identification of restorer lines
Ngangkham U., Parida S.K., De S., Anand Raj Kumar K., Singh A.K., Singh N.K., Mohapatra T.
Molecular Breeding 2010  26(2)  275-292
Genic markers for wild abortive (WA) cytoplasm based male sterility and its fertility restoration in rice
Ahmadikhah A., I. Karlov G.
Plant Breeding 2006  125  363-367
Molecular mapping of the fertility-restoration gene Rf4 for WA-cytoplasmic male sterility in rice
Qun-Yu Zhang, Yao-Guang Liu, Gui-Quan Zhang, Man-Tong Mei
Yi Chuan Xue Bao 2002  29(11)  1001-4
[Molecular mapping of the fertility restorer gene Rf-4 for WA cytoplasmic male sterility in rice].
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DB Reference
Gramene ID -
Ontologies
Gene Ontology mitochondrion( GO:0005739 )
Trait Ontology male fertility restoration trait( TO:0000308 )
pollen fertility( TO:0000421 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Nov 27, 2017


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