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Basic Information
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CGSNL Gene Symbol
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_
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Gene Symbol Synonym
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Rf4, Rf-4, PPR782a, PPR9, PPR3
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CGSNL Gene Name
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_
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Gene Name Synonym
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restorer-of-fertility 4, fertility restorer 4, pentatricopeptide repeat (PPR)-encoding gene 782a, pentatricopeptide repeat-containing protein 782a, pentatricopeptide repeat protein 9, pentatricopeptide repeat motif containing gene 3, PPR motif-containing gene 3
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Protein Name
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Allele
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rf4, Rf4-M, rf4-j, rf4-i, PPR9-782-M, PPR9-782-N, PPR9-782-I, PPR9-782-ZH, PPR9-409-J, PPR9-409-Z, PPR9-409-93
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Chromosome No.
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10
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Explanation
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AB110443. AB900792. Two genes PPR683 and PPR762 were considered as candidate genes in the Rf4 locus. KJ680247-KJ680250. PPR3 in Ngangkham et al. 2010. PPR9 in Tang et al. 2014. PPR782a in Kazama and Toriyama 2014.
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Trait Class
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Reproductive organ - Pollination, fertilization, fertility - Fertility restoration
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK287434
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MSU ID
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LOC_Os10g35240.1
LOC_Os10g35240.2
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RAP ID
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Os10g0495200
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Gu Z., Gong J., Zhu Z., Li Z., Feng Q., Wang C., Zhao Y., Zhan Q., Zhou C., Wang A., Huang T., Zhang L., Tian Q., Fan D., Lu Y., Zhao Q., Huang X., Yang S., Han B.
Nat. Genet. 2023 55(10) 1745-1756
Structure and function of rice hybrid genomes reveal genetic basis and optimal performance of heterosis.
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Fan F., Li N., Chen Y., Liu X., Sun H., Wang J., He G., Zhu Y., Li S.
Front Plant Sci 2017 8 986
Development of Elite BPH-Resistant Wide-Spectrum Restorer Lines for Three and Two Line Hybrid Rice.
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Tang H., Luo D., Zhou D., Zhang Q., Tian D., Zheng X., Chen L., Liu Y.G.
Mol Plant 2014 7(9) 1497-500
The rice restorer Rf4 for wild-abortive cytoplasmic male sterility encodes a mitochondrial-localized PPR protein that functions in reduction of WA352 transcripts.
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Kazama,T. and Toriyama,K.
Rice 7, 28 REMARK DOI:10.1186/s12284-014-0028-z 2014
A fertility restorer gene, Rf4, widely used for hybrid rice breeding encodes a pentatricopeptide repeat protein
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Luo D., Xu H., Liu Z., Guo J., Li H., Chen L., Fang C., Zhang Q., Bai M., Yao N., Wu H., Wu H., Ji C., Zheng H., Chen Y., Ye S., Li X., Zhao X., Li R., Liu Y.G.
Nat. Genet. 2013 45(5) 573-7
A detrimental mitochondrial-nuclear interaction causes cytoplasmic male sterility in rice.
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Ma H.
Nat. Genet. 2013 45(5) 472-3
A battle between genomes in plant male fertility.
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Balaji Suresh P., Srikanth B., Hemanth Kishore V., Subhakara Rao I., Vemireddy L.R., Dharika N., Sundaram R.M., Ramesha M.S., Sambasiva Rao K.R.S., Viraktamath B.C., Neeraja C.N.
Euphytica 2012 187 421-435
Fine mapping of Rf3 and Rf4 fertility restorer loci of WA-CMS of rice (Oryza sativa L.) and validation of the developed marker system for identification of restorer lines
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Ngangkham U., Parida S.K., De S., Anand Raj Kumar K., Singh A.K., Singh N.K., Mohapatra T.
Molecular Breeding 2010 26(2) 275-292
Genic markers for wild abortive (WA) cytoplasm based male sterility and its fertility restoration in rice
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Ahmadikhah A., I. Karlov G.
Plant Breeding 2006 125 363-367
Molecular mapping of the fertility-restoration gene Rf4 for WA-cytoplasmic male sterility in rice
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Qun-Yu Zhang, Yao-Guang Liu, Gui-Quan Zhang, Man-Tong Mei
Yi Chuan Xue Bao 2002 29(11) 1001-4
[Molecular mapping of the fertility restorer gene Rf-4 for WA cytoplasmic male sterility in rice].
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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mitochondrion( GO:0005739 )
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Trait Ontology
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male fertility restoration trait( TO:0000308 )
pollen fertility( TO:0000421 )
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Plant Ontology
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Related Strains
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Phenotype images
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Last updated
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Jan 17, 2024
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Update info.