Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol MADS91
Gene Symbol Synonym OsMADS91
CGSNL Gene Name MADS BOX GENE 91
Gene Name Synonym MADS box gene91, MADS box gene 91, MADS-box transcription factor 91
Protein Name MADS-BOX TRANSCRIPTION FACTOR 91
Allele osmads91, osmads91-1, osmads91-2
Chromosome No. 1
Explanation GO:0000981: DNA-binding transcription factor activity, RNA polymerase II-specific. TO:0001069: cooking quality trait.
Trait Class Seed - Physiological traits - Storage substances
Character as QTL - Grain quality
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os01g11510.1
RAP ID Os01g0213300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Huang K., Lu F., Chen P., Jiao G., Lin H., Zhang J., Zhao S., Cao R., Shao G., Sheng Z., Hu S., Tang S., Hu P., Wei X.
Plant Biotechnol. J. 2025  23(7)  2583-2594
A large-scale gene regulatory network for rice endosperm starch biosynthesis and its application in genetic improvement of rice quality.
Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007  8  242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
DB Reference
Gramene ID -
Ontologies
Gene Ontology regulation of transcription from RNA polymerase II promoter( GO:0006357 )
positive regulation of transcription from RNA polymerase II promoter( GO:0045944 )
RNA polymerase II regulatory transcription factor site sequence-specific DNA binding( GO:0000978 )
protein dimerization activity( GO:0046983 )
Trait Ontology amylose content( TO:0000196 )
seed quality( TO:0000162 )
chalky endosperm( TO:0000266 )
Plant Ontology endosperm development stage( PO:0007633 )
endosperm( PO:0009089 )
Related Strains
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Phenotype images
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Last updated
Sep 11, 2025

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