Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | MADS79 |
| Gene Symbol Synonym | OsMADS79 |
| CGSNL Gene Name | MADS BOX GENE 79 |
| Gene Name Synonym | MADS box gene79, MADS box gene 79, MADS-box transcription factor 79 |
| Protein Name | MADS-BOX TRANSCRIPTION FACTOR 79 |
| Allele | mads79_23 and mads79_24 |
| Chromosome No. | 1 |
| Explanation | GO:0071704: organic substance metabolic process. GO:1901135: carbohydrate derivative metabolic process. |
| Trait Class |
Reproductive organ - Pollination, fertilization, fertility
Seed - Morphological traits - Endosperm Seed - Morphological traits - Grain shape Seed - Physiological traits - Storage substances Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. | - |
| MSU ID |
LOC_Os01g74440.1
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| RAP ID |
Os01g0975800 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Yoon J., Cho L.H., Kim S.R., Tun W., Peng X., Pasriga R., Moon S., Hong W.J., Ji H., Jung K.H., Jeon J.S., An G.
Plant Biotechnol. J. 2021 CTP synthase is essential for early endosperm development by regulating nuclei spacing.
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Paul P., Dhatt B.K., Miller M., Folsom J.J., Wang Z., Krassovskaya I., Liu K., Sandhu J., Yu H., Zhang C., Obata T., Staswick P., Walia H.
Plant Physiol. 2020 182(2) 933-948 <i>MADS78</i> and <i>MADS79</i> Are Essential Regulators of Early Seed Development in Rice.
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Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007 8 242 MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
regulation of seed development( GO:0080050 )
cellularization of endosperm( GO:0010342 ) auxin homeostasis( GO:0010252 ) regulation of starch biosynthetic process( GO:0010581 ) regulation of nitrogen compound metabolic process( GO:0051171 ) regulation of transcription, DNA-dependent( GO:0006355 ) transcription, DNA-dependent( GO:0006351 ) nucleus( GO:0005634 ) DNA binding( GO:0003677 ) |
| Trait Ontology |
seed development trait( TO:0000653 )
seed size( TO:0000391 ) seed quality( TO:0000162 ) 1000-dehulled grain weight( TO:0000592 ) starch grain synthesis( TO:0002658 ) seed shape( TO:0000484 ) protein content( TO:0000598 ) glucose content( TO:0000300 ) fructose content( TO:0006005 ) endosperm storage protein content( TO:0002653 ) |
| Plant Ontology |
seed development stage( PO:0001170 )
seed( PO:0009010 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Oct 22, 2021 | |
