Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol MADS61
Gene Symbol Synonym OsMADS61, MADS-27b
CGSNL Gene Name MADS BOX GENE 61
Gene Name Synonym MADS box gene61, MADS box gene 61, MADS-box transcription factor 61
Protein Name MADS-BOX TRANSCRIPTION FACTOR 61
Allele
Chromosome No. 4
Explanation MADS-27b in Yan et al. 2014. one of the miR444 target genes. GO:1900458: negative regulation of brassinosteroid mediated signaling pathway. GO:2000280: regulation of root development.
Trait Class Vegetative organ - Root
Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK243669
MSU ID LOC_Os04g38770.1
LOC_Os04g38780.1
RAP ID Os04g0461300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Jiao X., Wang H., Yan J., Kong X., Liu Y., Chu J., Chen X., Fang R., Yan Y.
Plant Physiol. 2020  182(3)  1454-1466
Promotion of BR Biosynthesis by miR444 Is Required for Ammonium-Triggered Inhibition of Root Growth.
Wei J., Zheng Y., Feng H., Qu H., Fan X., Yamaji N., Ma J.F., Xu G.
J. Exp. Bot. 2018  69(5)  1095-1107
OsNRT2.4 encodes a dual-affinity nitrate transporter and functions in nitrate-regulated root growth and nitrate distribution in rice.
Puig J., Meynard D., Khong G.N., Pauluzzi G., Guiderdoni E., Gantet P.
Gene Expr. Patterns 2013  13(5-6)  160-170
Analysis of the expression of the AGL17-like clade of MADS-box transcription factors in rice.
Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007  8  242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
DB Reference
Gramene ID -
Ontologies
Gene Ontology negative regulation of brassinosteroid biosynthetic process( GO:0010423 )
brassinosteroid mediated signaling( GO:0009742 )
root development( GO:0048364 )
response to ammonium ion( GO:0060359 )
DNA binding( GO:0003677 )
nucleus( GO:0005634 )
transcription, DNA-dependent( GO:0006351 )
regulation of transcription, DNA-dependent( GO:0006355 )
cellular response to phosphate starvation( GO:0016036 )
Trait Ontology abiotic stress trait( TO:0000168 )
root length( TO:0000227 )
root development trait( TO:0000656 )
brassinosteroid content( TO:0002676 )
Plant Ontology root( PO:0009005 )
root development stage( PO:0007520 )
Related Strains
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Phenotype images
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Last updated
Nov 15, 2021

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