Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol WOX4
Gene Symbol Synonym OsWOX4, Os WOX4
CGSNL Gene Name WUSCHEL-LIKE HOMEOBOX 4
Gene Name Synonym WUSCHEL-related homeobox 4, WUSCHEL-RELATED HOMEOBOX4
Protein Name WUSCHEL-LIKE HOMEOBOX 4
Allele
Chromosome No. 4
Explanation AJ556181. AM234750. Q7XTV3, Q25AM2. JF836159. GO:0060918: auxin transport. TO:0000975: grain width. GO:0099402: plant organ development. PO:0030123: panicle inflorescence.
Trait Class Vegetative organ - Shoot apical meristem(SAM)
Vegetative organ - Culm
Vegetative organ - Root
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Other
Expression
Sequence/Locus
cDNA Accession No. AJ556181
MSU ID LOC_Os04g55590.1
RAP ID Os04g0649400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Chen R., Xu N., Yu B., Wu Q., Li X., Wang G., Huang J.
Plant Sci. 2020  298  110575
The WUSCHEL-related homeobox transcription factor OsWOX4 controls the primary root elongation by activating OsAUX1 in rice.
Tanaka W., Ohmori Y., Ushijima T., Matsusaka H., Matsushita T., Kumamaru T., Kawano S., Hirano H.Y.
Plant Cell 2015  27(4)  1173-84
Axillary Meristem Formation in Rice Requires the WUSCHEL Ortholog TILLERS ABSENT1.
Cheng S., Huang Y., Zhu N., Zhao Y.
Gene 2014  549(2)  266-74
The rice WUSCHEL-related homeobox genes are involved in reproductive organ development, hormone signaling and abiotic stress response.
Ohmori Y., Tanaka W., Kojima M., Sakakibara H., Hirano H.Y.
Plant Cell 2013  25(1)  229-41
WUSCHEL-RELATED HOMEOBOX4 is involved in meristem maintenance and is negatively regulated by the CLE gene FCP1 in rice.
Zhou, Dao-Xiu
Plant Physiol. 2007  144(1)  380-390
A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development.
Nardmann,J., Zimmermann,R., Durantini,D., Kranz,E. and Werr,W.
Mol. Biol. Evol. 2007  24(11)  2474-2484
WOX Gene Phylogeny in Poaceae: A Comparative Approach Addressing Leaf and Embryo Development
Nardmann,J. and Werr,W.
Mol. Biol. Evol. 2006  23(12)  2492-2504
The shoot stem cell niche in angiosperms: expression patterns of WUS orthologues in rice and maize imply major modifications in the course of mono- and dicot evolution
DB Reference
Gramene ID -
Ontologies
Gene Ontology transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription, DNA-dependent( GO:0006351 )
multicellular organismal development( GO:0007275 )
response to water deprivation( GO:0009414 )
embryonic development( GO:0009790 )
meristem maintenance( GO:0010073 )
sequence-specific DNA binding( GO:0043565 )
negative regulation of cell proliferation( GO:0008285 )
pollen development( GO:0009555 )
root development( GO:0048364 )
response to auxin stimulus( GO:0009733 )
response to cytokinin stimulus( GO:0009735 )
response to salt stress( GO:0009651 )
response to osmotic stress( GO:0006970 )
response to herbicide( GO:0009635 )
regulation of unidimensional cell growth( GO:0051510 )
negative gravitropism( GO:0009959 )
auxin polar transport( GO:0009926 )
Trait Ontology meristem identity( TO:0006017 )
drought tolerance( TO:0000276 )
embryo development trait( TO:0000620 )
root length( TO:0000227 )
grain yield( TO:0000396 )
plant height( TO:0000207 )
seed size( TO:0000391 )
grain length( TO:0000734 )
root meristem development( TO:0002692 )
auxin sensitivity( TO:0000163 )
cytokinin sensitivity( TO:0000167 )
salt tolerance( TO:0006001 )
osmotic response sensitivity( TO:0000095 )
herbicide sensitivity( TO:0000058 )
gravity response trait( TO:0002693 )
Plant Ontology pollen development stage( PO:0001007 )
leaf( PO:0025034 )
root( PO:0009005 )
leaf sheath( PO:0020104 )
seed( PO:0009010 )
Related Strains
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Phenotype images
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Last updated
Sep 23, 2020

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