Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol PDR12
Gene Symbol Synonym OsABCG42, ABCG42, OsPDR12, OsABCG42_1, OsABCG42_2
CGSNL Gene Name PLEIOTROPIC DRUG RESISTANCE 12
Gene Name Synonym ABC transporter superfamily ABCG subgroup member 42, pleiotropic drug resistance 12
Protein Name PLEIOTROPIC DRUG RESISTANCE 12
Allele
Chromosome No. 6
Explanation Q5Z9S8. AJ535043.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK121182
MSU ID LOC_Os06g36090.1
LOC_Os06g36090.2
RAP ID Os06g0554800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Du F., Wang Y., Wang J., Li Y., Zhang Y., Zhao X., Xu J., Li Z., Zhao T., Wang W., Fu B.
J Integr Plant Biol 2023   
The basic helix-loop-helix transcription factor gene, OsbHLH38, plays a key role in controlling rice salt tolerance.
Paul J Verrier, Bird D., Burla B., Dassa E., Forestier C., Geisler M., Klein M., Kolukisaoglu U., Lee Y., Martinoia E., Murphy A., Philip A Rea, Samuels L., Schulz B., Edgar J Spalding, Yazaki K., Frederica L Theodoulou
Trends Plant Sci. 2008  13(4)  151-9
Plant ABC proteins--a unified nomenclature and updated inventory.
Jérôme Crouzet, Trombik T., A Staffan Fraysse, Boutry M.
FEBS Lett. 2006  580(4)  1123-30
Organization and function of the plant pleiotropic drug resistance ABC transporter family.
Jasinski,M., Ducos,E., Martinoia,E. and Boutry,M.
Plant Physiol. 2003  131(3)  1169-1177
The ATP-binding cassette transporters: structure, function, and gene family comparison between rice and Arabidopsis.
DB Reference
Gramene ID -
Ontologies
Gene Ontology ATP binding( GO:0005524 )
ATP catabolic process( GO:0006200 )
ATPase activity( GO:0016887 )
transport( GO:0006810 )
integral to membrane( GO:0016021 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 12, 2023

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