|
Basic Information
|
|
CGSNL 遺伝子シンボル
|
GS5
|
|
遺伝子シンボルシノニム
|
OsSCP26, SCP26, OsGS5
|
|
CGSNL 遺伝子名
|
GRAIN SIZE 5
|
|
遺伝子名シノニム
|
serine carboxypeptidase 26, Grain Size 5
|
|
タンパク質名
|
SERINE CARBOXYPEPTIDASE 26
|
|
対立遺伝子
|
GS5-1, GS5-2, GS5-WG , GS5-MG, GS5-NG, GS5-A, GS5-B
|
|
染色体番号
|
5
|
|
解説
|
JN256055(H94 mRNA), JN256056(Zhenshan 97 mRNA), JN256057(H94 Genomic DNA), JN256058(Zhenshan 97, Genomic DNA). SCPL (serine carboxypeptidase-like) protein. Serine Carboxypeptidase Family (Peptidase_S10; PF00450). http://rice.plantbiology.msu.edu/ca/gene_fams/27_76.shtml
|
|
形質クラス
|
生化学的性質
種子 - 形態学的な特色 - 粒形
QTLの特性 - 粒品質
QTLの特性 - 収穫と生産性
|
|
発現
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK106800
|
|
MSU ID
|
LOC_Os05g06660.1
LOC_Os05g06660.2
|
|
RAP ID
|
Os05g0158500
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
マップ
|
|
位置情報(cM)
|
|
|
リンケージマップ
|
Classical linkage map
|
|
文献
|
|
Bai F., Ma H., Cai Y., Shahid M.Q., Zheng Y., Lang C., Chen Z., Wu J., Liu X., Wang L.
Plant Physiol. 2023
Natural Allelic Variation in GRAIN SIZE.AND WEIGHT 3 of Wild Rice Regulates the GRAIN SIZE.and Weight.
|
|
Zhang Y., Gan L., Zhang Y., Huang B., Wan B., Li J., Tong L., Zhou X., Wei Z., Li Y., Song Z., Zhang X., Cai D., He Y.
Plant J. 2023
OsCBL5-CIPK1-pp23 module enhances rice grain size and weight through the gibberellin pathway.
|
|
Li Y., Wang W., Hu C., Yang S., Ma C., Wu J., Wang Y., Xu Z., Li L., Huang Z., Zhu J., Jia X., Ye X., Yang Z., Sun Y., Liu H., Chen R.
Int J Mol Sci 2023 24(12)
Ectopic Expression of a Maize Gene <i>ZmDUF1645</i> in Rice Increases Grain Length and Yield, but Reduces Drought Stress Tolerance.
|
|
Li Z., Liu J., Wang X., Wang J., Ye J., Xu S., Zhang Y., Hu D., Zhang M., Xu Q., Wang S., Yang Y., Wei X., Feng Y., Wang S.
Plants (Basel) 2023 12(3)
<i>LG5</i>, a Novel Allele of <i>EUI1</i>, Regulates grain size and flag leaf Angle in Rice.
|
|
Li P., Li H., Liu Z., Zhuang Y., Wei M., Gu Y., Liu Y., Sun X., Tang Y., Yue L., Lu L., Luo D., Huang W., Tu S., Wang S.
Rice (N Y) 2020 13(1) 73
Characterization of the 'Oat-like rice' Caused by a Novel Allele OsMADS1Olr Reveals Vital Importance of OsMADS1 in Regulating grain shape in Oryza sativa L.
|
|
Chun Y., Fang J., Zafar S.A., Shang J., Zhao J., Yuan S., Li X.
Rice (N Y) 2020 13(1) 7
MINI SEED 2 (MIS2) Encodes a Receptor-like Kinase that Controls grain size and Shape in Rice.
|
|
Ma X., Feng F., Zhang Y., Elesawi I.E., Xu K., Li T., Mei H., Liu H., Gao N., Chen C., Luo L., Yu S.
PLoS Genet. 2019 15(5) e1008191
A novel rice grain size.gene OsSNB was identified by genome-wide association study in natural population.
|
|
Abbai R., Singh V.K., Nachimuthu V.V., Sinha P., Selvaraj R., Vipparla A.K., Singh A.K., Singh U.M., Varshney R.K., Kumar A.
Plant Biotechnol. J. 2019
Haplotype analysis of key genes governing grain yield and quality traits across 3K RG panel reveals scope for the development of tailor-made rice with enhanced genetic gains.
|
|
Gong R., Cao H., Zhang J., Xie K., Wang D., Yu S.
Plant J. 2018 94(1) 32-47
Divergent functions of the GAGA-binding transcription factor family in rice.
|
|
Ngangkham U., Samantaray S., Yadav M.K., Kumar A., Chidambaranathan P., Katara J.L.
PLoS ONE 2018 13(1) e0190684
Effect of multiple allelic combinations of genes on regulating grain size.in rice.
|
|
Qin R., Zeng D., Yang C., Akhter D., Alamin M., Jin X., Shi C.
Genes (Basel) 2018 9(6)
<i>LTBSG1</i>, a New Allele of <i>BRD2</i>, Regulates Panicle and Grain Development in Rice by Brassinosteroid Biosynthetic Pathway.
|
|
Cui D., Tang C., Li J., A X., Yu T., Ma X., Zhang E., Wang Y., Cao G., Xu F., Dai L., Han L., Koh H.J.
PLoS ONE 2017 12(4) e0175731
Genetic structure and isolation by altitude in rice landraces of Yunnan, China revealed by nucleotide and microsatellite marker polymorphisms.
|
|
Kim S.R., Ramos J., Ashikari M., Virk P.S., Torres E.A., Nissila E., Hechanova S.L., Mauleon R., Jena K.K.
Rice (N Y) 2016 9(1) 12
Development and validation of allele-specific SNP/indel markers for eight yield-enhancing genes using whole-genome sequencing strategy to increase yield potential of rice, Oryza sativa L.
|
|
Sun P., Zhang W., Wang Y., He Q., Shu F., Liu H., Wang J., Wang J., Yuan L., Deng H.
J Integr Plant Biol 2016
OsGRF4 controls grain shape, panicle length and seed shattering in rice.
|
|
Xu C., Liu Y., Li Y., Xu X., Xu C., Li X., Xiao J., Zhang Q.
J. Exp. Bot. 2015 66(9) 2611-23
Differential expression of GS5 regulates grain size.in rice.
|
|
Ikeda M., Miura K., Aya K., Kitano H., Matsuoka M.
Curr. Opin. Plant Biol. 2013 16(2) 213-20
Genes offering the potential for designing yield-related traits in rice.
|
|
Li,Y., Fan,C., Xing,Y., Jiang,Y., Luo,L., Sun,L., Shao,D., Xu,C., Li,X., Xiao,J., He,Y. and Zhang,Q.
Nat. Genet. 2011 43(12) 1266-1269
Natural variation in GS5 plays an important role in regulating grain size and yield in rice
|
|
Ouyang S., Zhu W., Hamilton J., Lin H., Campbell M., Childs K., Françoise Thibaud-Nissen, Renae L Malek, Lee Y., Zheng L., Orvis J., Haas B., Wortman J., C Robin Buell
Nucleic Acids Res. 2007 35(Database issue) D883-7
The TIGR Rice Genome Annotation Resource: improvements and new features.
|
|
Lokesh P Tripathi, R Sowdhamini
BMC Genomics 2006 7 200
Cross genome comparisons of serine proteases in Arabidopsis and rice.
|
|
TextPresso Search
|
Search textpresso for GS5
( Recent references may be retrievable, but without any warranty )
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
オントロジー
|
|
Gene Ontology
|
serine-type carboxypeptidase activity( GO:0004185 )
proteolysis( GO:0006508 )
|
|
Trait Ontology
|
grain size( TO:0000397 )
grain weight( TO:0000590 )
grain width( TO:0000402 )
grain length( TO:0000734 )
seed maturation( TO:0002661 )
|
|
Plant Ontology
|
-
|
|
関連系統
|
|
-
|
|
形質画像
|
|
-
|
|
更新日
|
|
2023-10-31 13:21:57.942
|
更新情報
フィードバックはこちら