Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol ABCB13
Gene Symbol Synonym OsABCB13, OsPGP13
CGSNL Gene Name ABC TRANSPORTER B FAMILY MEMBER 13
Gene Name Synonym ABC transporter superfamily ABCB subgroup member 13, P-Glycoprotein 13
Protein Name ABC TRANSPORTER B FAMILY MEMBER 13
Allele
Chromosome No. 3
Explanation LOC_Os03g17180.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK120269
MSU ID LOC_Os03g17180.1
RAP ID Os03g0280000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Shafiq S., Chen C., Yang J., Cheng L., Ma F., Widemann E., Sun Q.
Mol Plant 2017   
DNA Topoisomerase 1 prevents R-loop accumulation to modulate auxin-regulated root development in rice.
Chai C., Subudhi P.K.
Front Plant Sci 2016  7  593
Comprehensive Analysis and Expression Profiling of the OsLAX and OsABCB Auxin Transporter Gene Families in Rice (Oryza sativa) under Phytohormone Stimuli and Abiotic Stresses.
ChenJia Shen, YouHuang Bai, SuiKang Wang, SaiNa Zhang, YunRong Wu, Chen M., DeAn Jiang, YanHua Qi
FEBS J. 2010  277(14)  2954-69
Expression profile of PIN, AUX/LAX and PGP auxin transporter gene families in Sorghum bicolor under phytohormone and abiotic stress.
Paul J Verrier, Bird D., Burla B., Dassa E., Forestier C., Geisler M., Klein M., Kolukisaoglu U., Lee Y., Martinoia E., Murphy A., Philip A Rea, Samuels L., Schulz B., Edgar J Spalding, Yazaki K., Frederica L Theodoulou
Trends Plant Sci. 2008  13(4)  151-9
Plant ABC proteins--a unified nomenclature and updated inventory.
DB Reference
Gramene ID -
Ontologies
Gene Ontology ATP binding( GO:0005524 )
ATP catabolic process( GO:0006200 )
integral to membrane( GO:0016021 )
ATPase activity, coupled to transmembrane movement of substances( GO:0042626 )
plasma membrane( GO:0005886 )
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 )
response to abscisic acid stimulus( GO:0009737 )
Trait Ontology drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
abscisic acid sensitivity( TO:0000615 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 16, 2019

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