|
Basic Information
|
|
CGSNL Gene Symbol
|
TDD1
|
|
Gene Symbol Synonym
|
OsTDD1, ASB1, OASB1, OsASbeta1, ASbeta1, TDD1/OASB1
|
|
CGSNL Gene Name
|
TRYPTOPHAN DEFICIENT DWARF 1
|
|
Gene Name Synonym
|
anthranilate synthase beta subunit 1, Anthranilate synthase beta 1 subunit, tryptophan deficient dwarf
|
|
Protein Name
|
ANTHRANILATE SYNTHASE BETA-SUBUNIT 1
|
|
Allele
|
tdd1
|
|
Chromosome No.
|
4
|
|
Explanation
|
AB116721. a predicted lethal-phenotype gene in Lloyd et al. 2015. TO:0020106: Indole-3-acetic acid content.
|
|
Trait Class
|
Reproductive organ - Spikelet, flower, glume, awn
Vegetative organ - Culm
Tolerance and resistance - Insect resistance
Vegetative organ - Root
Biochemical character
Vegetative organ - Leaf
Tolerance and resistance - Stress tolerance
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK107879
|
|
MSU ID
|
LOC_Os04g38950.1
LOC_Os04g38950.2
LOC_Os04g38950.3
|
|
RAP ID
|
Os04g0463500
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Zhang L., Feng P., Deng Y., Yin W., Wan Y., Lei T., He G., Wang N.
Rice (N Y) 2021 14(1) 13
Decreased Vascular Bundle 1 affects mitochondrial and plant development in rice.
|
|
Wang H., Shi Y., Zhang X., Xu X., Wu J.L.
Int J Mol Sci 2020 21(4)
Characterization of a Novel Rice Dynamic Narrow-rolled leaf Mutant with Deficiencies in Aromatic Amino Acids.
|
|
Guo T., Chen K., Dong N.Q., Ye W.W., Shan J.X., Lin H.X.
J Integr Plant Biol 2019
Tillering and small grain 1 dominates the tryptophan aminotransferase family required for local auxin biosynthesis in rice.
|
|
Lu H.P., Luo T., Fu H.W., Wang L., Tan Y.Y., Huang J.Z., Wang Q., Ye G.Y., Gatehouse A.M.R., Lou Y.G., Shu Q.Y.
Nat Plants 2018 4(6) 338-344
Resistance of rice to insect pests mediated by suppression of serotonin biosynthesis.
|
|
Lloyd J.P., Seddon A.E., Moghe G.D., Simenc M.C., Shiu S.H.
Plant Cell 2015
Characteristics of Plant Essential Genes Allow for within- and between-Species Prediction of Lethal Mutant Phenotypes.
|
|
Park H.L., Lee S.W., Jung K.H., Hahn T.R., Cho M.H.
Phytochemistry 2013 96 57-71
Transcriptomic analysis of UV-treated rice leaves reveals UV-induced phytoalexin biosynthetic pathways and their regulatory networks in rice.
|
|
Sazuka T,Kamiya N,Nishimura T,Ohmae K,Sato Y,Imamura K,Nagato Y,Koshiba T,Nagamura Y,Ashikari M,Kitano H,Matsuoka M
Plant J. 2009 60(2) 227-41
A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos.
|
|
Kanno,T., Kasai,K., Ikejiri-Kanno,Y., Wakasa,K. and Tozawa,Y.
Plant Mol. Biol. 2004 54(1) 11-23
In vitro reconstitution of rice anthranilate synthase: distinct functional properties of the alpha subunits OASA1 and OASA2.
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
chloroplast( GO:0009507 )
response to bacterium( GO:0009617 )
response to UV( GO:0009411 )
response to ethylene stimulus( GO:0009723 )
auxin biosynthetic process( GO:0009851 )
defense response to insect( GO:0002213 )
indoleacetic acid biosynthetic process via tryptophan( GO:0009848 )
tryptophan biosynthetic process( GO:0000162 )
embryonic development( GO:0009790 )
response to salt stress( GO:0009651 )
|
|
Trait Ontology
|
UV light sensitivity( TO:0000160 )
brown planthopper resistance( TO:0000424 )
plant height( TO:0000207 )
leaf width( TO:0000370 )
root length( TO:0000227 )
flower anatomy and morphology trait( TO:0000499 )
auxin content( TO:0002672 )
embryo related trait( TO:0000064 )
tryptophan content( TO:0002674 )
|
|
Plant Ontology
|
-
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
May 28, 2021
|
Update info.