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Basic Information
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CGSNL Gene Symbol
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MIR171
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Gene Symbol Synonym
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miR171, osa-miR171, miR171a, osa-miR171a, osa-MIR171a
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CGSNL Gene Name
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MICRORNA171
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Gene Name Synonym
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osa-miRNA171, MICRORNA171a, osa-miRNA171a
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Protein Name
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_
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Allele
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Chromosome No.
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6
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Explanation
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miRBASE accession: MI0000680. target gene(s): GRAS transcription factors. LM379167.
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Trait Class
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Tolerance and resistance - Stress tolerance
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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-
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RAP ID
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-
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Links
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Mondal T.K., Ganie S.A.
Gene 2014 535 204-209
Identification and characterization of salt responsive miRNA-SSR markers in rice (oryza sativa)
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Devi S.J., Madhav M.S., Kumar G.R., Goel A.K., Umakanth B., Jahnavi B., Viraktamath B.C.
Gene 2013 531(1) 15-22
Identification of abiotic stress miRNA transcription factor binding motifs (TFBMs) in rice.
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Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011 23(12) 4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
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Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011 39 D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
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Ding Y., Chen Z., Zhu C.
J. Exp. Bot. 2011 62(10) 3563-73
Microarray-based analysis of cadmium-responsive microRNAs in rice (Oryza sativa).
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Brenda J Reinhart, Earl G Weinstein, Matthew W Rhoades, Bartel B., David P Bartel
Genes Dev. 2002 16(13) 1616-26
MicroRNAs in plants.
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Matthew W Rhoades, Brenda J Reinhart, Lee P Lim, Christopher B Burge, Bartel B., David P Bartel
Cell 2002 110(4) 513-20
Prediction of plant microRNA targets.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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mRNA cleavage( GO:0006379 )
response to salt stress( GO:0009651 )
RNA-induced silencing complex( GO:0016442 )
micro-ribonucleoprotein complex( GO:0035068 )
gene silencing by miRNA( GO:0035195 )
response to cadmium ion( GO:0046686 )
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Trait Ontology
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salt sensitivity( TO:0000429 )
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Plant Ontology
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-
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Oct 20, 2015
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Update info.