Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol MIR164A
Gene Symbol Synonym miR164a, osa-miR164a
CGSNL Gene Name MICRORNA164A
Gene Name Synonym MICRORNA164a, osa-miRNA164a
Protein Name _
Allele
Chromosome No. 7
Explanation miRBASE accession: MI0000668. HM139156-HM139197 (O. sativa, O. rufipogon). LM379155. authentic target genes of miR164a: OsNAC60 (LOC_Os12g41680), OsNAC11 (LOC_Os06g46270).
Trait Class Tolerance and resistance - Disease resistance
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Jia Y., Li C., Li Q., Liu P., Liu D., Liu Z., Wang Y., Jiang G., Zhai W.
Int J Mol Sci 2020  21(3) 
Characteristic Dissection of <i>Xanthomonas oryzae</i> pv. o<i>ryzae</i> Responsive MicroRNAs in Rice.
Wang Z., Xia Y., Lin S., Wang Y., Guo B., Song X., Ding S., Zheng L., Feng R., Chen S., Bao Y., Sheng C., Zhang X., Wu J., Niu D., Jin H., Zhao H.
Plant J. 2018   
osa-miR164a targets OsNAC60 and negatively regulates rice immunity against the blast fungus Magnaporthe oryzae.
Fang Y., Xie K., Xiong L.
J. Exp. Bot. 2014  65(8)  2119-35
Conserved miR164-targeted NAC genes negatively regulate drought resistance in rice.
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011  39  D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
Wang,Y., Shen,D., Bo,S., Chen,H., Zheng,J., Zhu,Q.H., Cai,D., Helliwell,C. and Fan,L.
BMC Evol. Biol. 2010  10  119
Sequence variation and selection of small RNAs in domesticated rice
Matthew W. Jones-Rhoades, David P. Bartel, Bartel B.
Annu. Rev. Plant Biol. 2006  57  19-53
MicroRNAs and Their Regulatory Roles in Plants
Brenda J Reinhart, Earl G Weinstein, Matthew W Rhoades, Bartel B., David P Bartel
Genes Dev. 2002  16(13)  1616-26
MicroRNAs in plants.
DB Reference
Gramene ID -
Ontologies
Gene Ontology mRNA cleavage( GO:0006379 )
gene silencing by miRNA( GO:0035195 )
micro-ribonucleoprotein complex( GO:0035068 )
RNA-induced silencing complex( GO:0016442 )
defense response to fungus( GO:0050832 )
salicylic acid mediated signaling pathway( GO:0009863 )
defense response to bacterium( GO:0042742 )
Trait Ontology blast disease( TO:0000074 )
bacterial blight disease resistance( TO:0000175 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 22, 2020

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