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Basic Information
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CGSNL Gene Symbol
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MIR156A
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Gene Symbol Synonym
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miR156a, OsmiR156a, osmiR156a, osa-miR156a, osa-MIR156a
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CGSNL Gene Name
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MICRORNA156A
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Gene Name Synonym
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micro RNA 156a, microRNA156a, osa-miRNA156a
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Protein Name
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_
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Allele
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Chromosome No.
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1
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Explanation
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miRBASE accession: MI0000653. target gene(s): SPL (Squamosa Promoter binding protein Like) gene family. LM379141. Targets: Os01g0922600, Os02g0139400, Os11g0496600 (Kansal et al. 2021).
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Trait Class
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Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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-
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RAP ID
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-
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Links
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Kansal S., Panwar V., Mutum R.D., Raghuvanshi S.
Front Plant Sci 2021 12 720009
Investigations on Regulation of MicroRNAs in Rice Reveal [Ca2+]cyt Signal Transduction Regulated MicroRNAs.
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Zhu J., Li Y., Lin J., Wu Y., Guo H., Shao Y., Wang F., Wang X., Mo X., Zheng S., Yu H., Mao C.
Plant J. 2019
crd1, an Xpo1 domain protein, regulates miRNA accumulation and crown root development in rice.
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Zhang D., Liu M., Tang M., Dong B., Wu D., Zhang Z., Zhou B.
Plant Sci. 2015 237 24-32
Repression of microRNA biogenesis by silencing of OsDCL1 activates the basal resistance to Magnaporthe oryzae in rice.
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Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011 39 D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
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Ding Y., Chen Z., Zhu C.
J. Exp. Bot. 2011 62(10) 3563-73
Microarray-based analysis of cadmium-responsive microRNAs in rice (Oryza sativa).
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Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011 23(12) 4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
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Xie K, Wu C, Xiong L.
Plant Physiol. 2006 142(1) 280-293
Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice.
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Brenda J Reinhart, Earl G Weinstein, Matthew W Rhoades, Bartel B., David P Bartel
Genes Dev. 2002 16(13) 1616-26
MicroRNAs in plants.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
gene silencing by miRNA( GO:0035195 )
micro-ribonucleoprotein complex( GO:0035068 )
defense response to fungus( GO:0050832 )
response to cadmium ion( GO:0046686 )
calcium-mediated signaling( GO:0019722 )
response to water deprivation( GO:0009414 )
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Trait Ontology
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blast disease( TO:0000074 )
drought tolerance( TO:0000276 )
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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May 20, 2022
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Update info.