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Basic Information
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CGSNL Gene Symbol
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NCED1
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Gene Symbol Synonym
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OsNCED1, OsCCD4a, CCD4a
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CGSNL Gene Name
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9-CIS-EPOXYCAROTENOID DIOXYGENASE 1
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Gene Name Synonym
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9-cis-epoxycarotenoid dioxygenase 1, carotenoid-cleavage dioxygenase 4a, "zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplastic"
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Protein Name
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9-CIS-EPOXYCAROTENOID DIOXYGENASE 1
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Allele
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Chromosome No.
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2
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Explanation
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AY838897. AB110203. a neoxanthin cleavage enzyme-like protein.
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Trait Class
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Biochemical character
Coloration - Anthocyanin
Coloration - Others
Tolerance and resistance - Disease resistance
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK064824
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MSU ID
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LOC_Os02g47510.1
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RAP ID
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Os02g0704000
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Wang B., Luo Y., Zhong B., Xu H., Wang F., Li W., Lin M., Chen J., Chen L., Liang M., Dai X.
Sci Rep 2025 15(1) 6730
The abscisic acid signaling negative regulator OsPP2C68 confers drought and salinity tolerance to rice.
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Dai H., Ai H., Wang Y., Shi J., Ren L., Li J., Tao Y., Xu Z., Zheng J.
Int J Mol Sci 2024 25(19)
Molecular Characteristics and Expression Patterns of Carotenoid Cleavage Oxygenase Family Genes in Rice (<i>Oryza sativa</i> L.).
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Long Q., Qiu S., Man J., Ren D., Xu N., Luo R.
Rice (N Y) 2023 16(1) 35
OsAAI1 Increases Rice Yield and drought tolerance Dependent on ABA-Mediated Regulatory and ROS Scavenging Pathway.
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Jardim-Messeder D., Caverzan A., Balbinott N., Menguer P.K., Paiva A.L.S., Lemos M., Cunha J.R., Gaeta M.L., Costa M., Zamocky M., Saibo N.J.M., Silveira J.A.G., Margis R., Margis-Pinheiro M.
Antioxidants (Basel) 2023 12(2)
Stromal Ascorbate Peroxidase (<i>OsAPX7</i>) Modulates Drought Stress Tolerance in Rice (<i>Oryza sativa</i>).
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Li Q., Zhai W., Wei J., Jia Y.
Front Genet 2023 14 1111318
Rice lipid transfer protein, OsLTPL23, controls seed germination by regulating starch-sugar conversion and ABA homeostasis.
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He Y., Chen S., Liu K., Chen Y., Cheng Y., Zeng P., Zhu P., Xie T., Chen S., Zhang H., Cheng J.
Plant Biotechnol. J. 2022 20(7) 1346-1362
OsHIPL1, a hedgehog-interacting protein-like 1 protein, increases seed vigour in rice.
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Zhou Z., Fan J., Zhang J., Yang Y., Zhang Y., Zan X., Li X., Wan J., Gao X., Chen R., Huang Z., Xu Z., Li L.
Plants (Basel) 2022 11(13)
<i>OsMLP423</i> Is a Positive Regulator of Tolerance to Drought and Salt Stresses in Rice.
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Kim H.K., Kim J.Y., Kim J.H., Go J.Y., Jung Y.S., Lee H.J., Ahn M.J., Yu J., Bae S., Kim H.S., Kwak S.S., Kim M.S., Cho Y.G., Jung Y.J., Kang K.K.
Plants (Basel) 2022 12(1)
Biochemical Characterization of Orange-Colored Rice Calli Induced by Target Mutagenesis of <i>OsOr</i> Gene.
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Zhang Q., Liu Y., Jiang Y., Li A., Cheng B., Wu J.
Int J Mol Sci 2022 23(16)
<i>OsASR6</i> Enhances Salt Stress Tolerance in Rice.
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Ge L., Guo H., Li X., Tang M., Guo C., Bao H., Huang L., Yi Y., Cui Y., Chen L.
Front Plant Sci 2022 13 863233
OsSIDP301, a Member of the DUF1644 Family, Negatively Regulates Salt Stress and grain size in Rice.
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Li J., Chen L., Ding X., Fan W., Liu J.
Int J Mol Sci 2022 23(11)
Transcriptome Analysis Reveals Crosstalk between the Abscisic Acid and Jasmonic Acid Signaling Pathways in Rice-Mediated Defense against <i>Nilaparvata lugens</i>.
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Li R., Jiang M., Song Y., Zhang H.
Front Plant Sci 2021 12 727596
Melatonin Alleviates Low-Temperature Stress <i>via</i> ABI5-Mediated Signals During Seed Germination in Rice (<i>Oryza sativa</i> L.).
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Santosh Kumar VV., Yadav S.K., Verma R.K., Shrivastava S., Ghimire O., Pushkar S., Rao M.V., Senthil Kumar T., Chinnusamy V.
J. Exp. Bot. 2021 72(4) 1411-1431
The abscisic acid receptor OsPYL6 confers drought tolerance to indica rice through dehydration avoidance and tolerance mechanisms.
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Wang Y., Du F., Wang J., Li Y., Zhang Y., Zhao X., Zheng T., Li Z., Xu J., Wang W., Fu B.
Int J Mol Sci 2021 22(17)
Molecular Dissection of the Gene <i>OsGA2ox8</i> Conferring Osmotic Stress Tolerance in Rice.
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Liu Q., Dong G.R., Ma Y.Q., Zhao S.M., Liu X., Li X.K., Li Y.J., Hou B.K.
Front Plant Sci 2021 12 790195
Rice Glycosyltransferase Gene <i>UGT85E1</i> Is Involved in Drought Stress Tolerance Through Enhancing Abscisic Acid Response.
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Verma R.K., Santosh Kumar VV., Yadav S.K., Pushkar S., Rao M.V., Chinnusamy V.
Front Plant Sci 2019 10 1488
Overexpression of ABA Receptor <i>PYL10</i> Gene Confers Drought and Cold Tolerance to Indica Rice.
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Chen X., Tao Y., Ali A., Zhuang Z., Guo D., Guo Q., Riaz A., Zhang H., Xu P., Liao Y., Wang J., Sun C., Xiang Q., Wu X.
Int J Mol Sci 2019 20(10)
Transcriptome and Proteome Profiling of Different Colored Rice Reveals Physiological Dynamics Involved in the Flavonoid Pathway.
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Chen B.X., Peng Y.X., Gao J.D., Zhang Q., Liu Q.J., Fu H., Liu J.
Front Plant Sci 2019 10 828
Coumarin-Induced Delay of Rice Seed Germination Is Mediated by Suppression of Abscisic Acid Catabolism and Reactive Oxygen Species Production.
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Ko M.R., Song M.H., Kim J.K., Baek S.A., You M.K., Lim S.H., Ha S.H.
J. Exp. Bot. 2018 69(21) 5105-5116
RNAi-mediated suppression of three carotenoid-cleavage dioxygenase genes, OsCCD1, 4a, and 4b, increases carotenoid content in rice.
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He Y., Li L., Zhang Z., Wu J.L.
Int J Mol Sci 2018 19(1)
Identification and Comparative Analysis of Premature Senescence Leaf Mutants in Rice (Oryza sativa L.).
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Hong Y., Zhang H., Huang L., Li D., Song F.
Front Plant Sci 2016 7 4
Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and salt tolerance in Rice.
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Shi L., Guo M., Ye N., Liu Y., Liu R., Xia Y., Cui S., Zhang J.
Plant Cell Physiol. 2015 56(5) 951-64
Reduced ABA Accumulation in the root system is Caused by ABA Exudation in Upland Rice (Oryza sativa L. var. Gaoshan1) and this Enhanced Drought Adaptation.
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Du W., Cheng J., Cheng Y., Wang L., He Y., Wang Z., Zhang H.
Plant Biol (Stuttg) 2015
Physiological characteristics and related gene expression of after-ripening on seed dormancy release in rice.
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Liang C., Wang Y., Zhu Y., Tang J., Hu B., Liu L., Ou S., Wu H., Sun X., Chu J., Chu C.
Proc. Natl. Acad. Sci. U.S.A. 2014 111(27) 10013-8
OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic acid biosynthesis and directly targeting senescence-associated genes in rice.
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Liu H., Li X., Xiao J., Wang S.
Plant Methods 2012 8(1) 2
A convenient method for simultaneous quantification of multiple phytohormones and metabolites: application in study of rice-bacterium interaction.
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Zhu G,Ye N,Zhang J
Plant Cell Physiol. 2009 50 644-51
Glucose-induced delay of seed germination in rice is mediated by the suppression of ABA catabolism rather than an enhancement of ABA biosynthesis.
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Moriguchi,K., Suzuki,T., Ito,Y., Yamazaki,Y., Niwa,Y. and Kurata,N.
Plant Cell 2005 17(2) 389-403
Functional isolation of novel nuclear proteins showing a variety of subnuclear localizations.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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plastoglobule( GO:0010287 )
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen( GO:0016702 )
dioxygenase activity( GO:0051213 )
response to osmotic stress( GO:0006970 )
response to water deprivation( GO:0009414 )
flavonoid biosynthetic process( GO:0009813 )
defense response to bacterium( GO:0042742 )
abscisic acid biosynthetic process( GO:0009688 )
response to hormone stimulus( GO:0009725 )
response to cold( GO:0009409 )
response to jasmonic acid stimulus( GO:0009753 )
defense response to insect( GO:0002213 )
response to abscisic acid stimulus( GO:0009737 )
response to salt stress( GO:0009651 )
response to flooding( GO:0009413 )
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Trait Ontology
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drought tolerance( TO:0000276 )
osmotic response sensitivity( TO:0000095 )
carotenoid content( TO:0000496 )
carotene content( TO:0000289 )
xanthophyll content( TO:0000301 )
bacterial blight disease resistance( TO:0000175 )
abscisic acid content( TO:0002667 )
cold tolerance( TO:0000303 )
plant growth hormone sensitivity( TO:0000401 )
brown planthopper resistance( TO:0000424 )
jasmonic acid sensitivity( TO:0000172 )
flooding related trait( TO:0000114 )
salt tolerance( TO:0006001 )
abscisic acid sensitivity( TO:0000615 )
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Plant Ontology
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leaf( PO:0025034 )
inflorescence( PO:0009049 )
seedling( PO:0008037 )
seedling development stage( PO:0007131 )
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Related Strains
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Phenotype images
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Last updated
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Jun 26, 2025
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Update info.