Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol NCED1
Gene Symbol Synonym OsNCED1, OsCCD4a, CCD4a
CGSNL Gene Name 9-CIS-EPOXYCAROTENOID DIOXYGENASE 1
Gene Name Synonym 9-cis-epoxycarotenoid dioxygenase 1, carotenoid-cleavage dioxygenase 4a, "zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplastic"
Protein Name 9-CIS-EPOXYCAROTENOID DIOXYGENASE 1
Allele
Chromosome No. 2
Explanation AY838897. AB110203. a neoxanthin cleavage enzyme-like protein.
Trait Class Biochemical character
Coloration - Anthocyanin
Coloration - Others
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK064824
MSU ID LOC_Os02g47510.1
RAP ID Os02g0704000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
-
Map
Locate(cM)
Link map Classical linkage map
References
Chen B.X., Peng Y.X., Gao J.D., Zhang Q., Liu Q.J., Fu H., Liu J.
Front Plant Sci 2019  10  828
Coumarin-Induced Delay of Rice Seed Germination Is Mediated by Suppression of Abscisic Acid Catabolism and Reactive Oxygen Species Production.
Chen X., Tao Y., Ali A., Zhuang Z., Guo D., Guo Q., Riaz A., Zhang H., Xu P., Liao Y., Wang J., Sun C., Xiang Q., Wu X.
Int J Mol Sci 2019  20(10) 
Transcriptome and Proteome Profiling of Different Colored Rice Reveals Physiological Dynamics Involved in the Flavonoid Pathway.
He Y., Li L., Zhang Z., Wu J.L.
Int J Mol Sci 2018  19(1) 
Identification and Comparative Analysis of Premature Senescence Leaf Mutants in Rice (Oryza sativa L.).
Ko M.R., Song M.H., Kim J.K., Baek S.A., You M.K., Lim S.H., Ha S.H.
J. Exp. Bot. 2018  69(21)  5105-5116
RNAi-mediated suppression of three carotenoid-cleavage dioxygenase genes, OsCCD1, 4a, and 4b, increases carotenoid content in rice.
Hong Y., Zhang H., Huang L., Li D., Song F.
Front Plant Sci 2016  7  4
Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and salt tolerance in Rice.
Du W., Cheng J., Cheng Y., Wang L., He Y., Wang Z., Zhang H.
Plant Biol (Stuttg) 2015   
Physiological characteristics and related gene expression of after-ripening on seed dormancy release in rice.
Shi L., Guo M., Ye N., Liu Y., Liu R., Xia Y., Cui S., Zhang J.
Plant Cell Physiol. 2015  56(5)  951-64
Reduced ABA Accumulation in the root system is Caused by ABA Exudation in Upland Rice (Oryza sativa L. var. Gaoshan1) and this Enhanced Drought Adaptation.
Liang C., Wang Y., Zhu Y., Tang J., Hu B., Liu L., Ou S., Wu H., Sun X., Chu J., Chu C.
Proc. Natl. Acad. Sci. U.S.A. 2014  111(27)  10013-8
OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic acid biosynthesis and directly targeting senescence-associated genes in rice.
Liu H., Li X., Xiao J., Wang S.
Plant Methods 2012  8(1)  2
A convenient method for simultaneous quantification of multiple phytohormones and metabolites: application in study of rice-bacterium interaction.
Zhu G,Ye N,Zhang J
Plant Cell Physiol. 2009  50  644-51
Glucose-induced delay of seed germination in rice is mediated by the suppression of ABA catabolism rather than an enhancement of ABA biosynthesis.
Moriguchi,K., Suzuki,T., Ito,Y., Yamazaki,Y., Niwa,Y. and Kurata,N.
Plant Cell 2005  17(2)  389-403
Functional isolation of novel nuclear proteins showing a variety of subnuclear localizations.
TextPresso Search Search textpresso for NCED1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology flavonoid biosynthetic process( GO:0009813 )
plastoglobule( GO:0010287 )
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen( GO:0016702 )
dioxygenase activity( GO:0051213 )
abscisic acid biosynthetic process( GO:0009688 )
defense response to bacterium( GO:0042742 )
response to osmotic stress( GO:0006970 )
response to water deprivation( GO:0009414 )
Trait Ontology bacterial blight disease resistance( TO:0000175 )
abscisic acid content( TO:0002667 )
drought tolerance( TO:0000276 )
osmotic response sensitivity( TO:0000095 )
carotenoid content( TO:0000496 )
carotene content( TO:0000289 )
xanthophyll content( TO:0000301 )
Plant Ontology leaf( PO:0025034 )
Related Strains
-
Phenotype images
-
Last updated
Jan 16, 2020


Login ID
Password
/rice/oryzabase