Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol NLA1
Gene Symbol Synonym OsRFPHC-13, OsNLA, NLA, OsNLA1, OsNLA1.1, OsNLA1.2, OsNLA1.3, OsRING269, RING269
CGSNL Gene Name NITROGEN LIMITATION ADAPTATION 1
Gene Name Synonym RING finger protein OsRFPHC-13, RING-HC protein 13, nitrogen limitation adaptation, RING-type E3 ubiquitin ligase 269
Protein Name
Allele osnla1, osnla1-1, osnla1-2, Osnla1-3, osnla1-4
Chromosome No. 7
Explanation Q7XI73. a rice homolog of AtNLA. one of the two orthologs of Arabidopsis NLA (AtNLA) in rice. RING-type E3 ubiquitin-ligase. TO:0020102: phosphate content.
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK065454
MSU ID LOC_Os07g47590.1
LOC_Os07g47590.2
LOC_Os07g47590.3
RAP ID Os07g0673200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022  23(1)  154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
Bhattacharjee A., Srivastava P.L., Nath O., Jain M.
Plant Mol. Biol. 2021  105(1-2)  205-214
Genome-wide discovery of OsHOX24-binding sites and regulation of desiccation stress response in rice.
Yang S.Y., Lu W.C., Ko S.S., Sun C.M., Hung J.C., Chiou T.J.
Plant Physiol. 2020  182(1)  393-407
Upstream Open Reading Frame and Phosphate-Regulated Expression of Rice <i>OsNLA1</i> Controls Phosphate Transport and Reproduction.
Zhong S., Mahmood K., Bi Y.M., Rothstein S.J., Ranathunge K.
Front Plant Sci 2017  8  928
Altered Expression of OsNLA1 Modulates Pi Accumulation in Rice (Oryza sativa L.) Plants.
Yue W., Ying Y., Wang C., Zhao Y., Dong C., Whelan J., Shou H.
Plant J. 2017   
OsNLA1, a RING-type ubiquitin ligase, maintains phosphate homeostasis in Oryza sativa via degradation of phosphate transporters.
Yang J., Wang L., Mao C., Lin H.
Rice (N Y) 2017  10(1)  52
Characterization of the rice NLA family reveals a key role for OsNLA1 in phosphate homeostasis.
Lim S.D., Hwang J.G., Han A.R., Park Y.C., Lee C., Ok Y.S., Jang C.S.
Plant Mol. Biol. 2014  85(4-5)  365-79
Positive regulation of rice RING E3 ligase OsHIR1 in arsenic and cadmium uptakes.
Lim S.D., Hwang J.G., Jung C.G., Hwang S.G., Moon J.C., Jang C.S.
DNA Res. 2013  20(3)  299-314
Comprehensive Analysis of the Rice RING E3 Ligase Family Reveals Their Functional Diversity in Response to Abiotic stress.
Lin S.-I., Santi C., Jobet E., Lacut E., El Kholti N., Karlowski W.M., Verdeil J.-L., Breitler J.C., Perin C., Ko S.-S., Guiderdoni E., Chiou T.-J., Echeverria M.
Plant Cell Physiol. 2010  51(12)  2119-2131
Complex regulation of two target genes encoding SPX-MFS proteins by rice miR827 in response to phosphate starvation.
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to desiccation( GO:0009269 )
anion homeostasis( GO:0055081 )
response to water deprivation( GO:0009414 )
nucleus( GO:0005634 )
zinc ion binding( GO:0008270 )
plant-type hypersensitive response( GO:0009626 )
systemic acquired resistance( GO:0009627 )
salicylic acid biosynthetic process( GO:0009697 )
response to salicylic acid stimulus( GO:0009751 )
response to nitrate( GO:0010167 )
regulation of salicylic acid metabolic process( GO:0010337 )
protein ubiquitination( GO:0016567 )
ligase activity( GO:0016874 )
defense response to bacterium( GO:0042742 )
response to benzoic acid stimulus( GO:0080021 )
phosphate ion homeostasis( GO:0055062 )
regulation of phosphate transport( GO:0010966 )
root hair elongation( GO:0048767 )
pollen development( GO:0009555 )
plasma membrane( GO:0005886 )
Trait Ontology root hair length( TO:0002665 )
pollen fertility( TO:0000421 )
drought tolerance( TO:0000276 )
osmotic adjustment capacity( TO:0000507 )
Plant Ontology pollen development stage( PO:0001007 )
root( PO:0009005 )
leaf( PO:0025034 )
leaf sheath( PO:0020104 )
pollen( PO:0025281 )
anther( PO:0009066 )
ligule( PO:0020105 )
Related Strains
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Phenotype images
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Last updated
Mar 14, 2023

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