Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol RFPHC-1
Gene Symbol Synonym OsRFPHC-1, OsNLA2, NLA2, OsNLA2.1, OsNLA2.2, OsRING348, RING348
CGSNL Gene Name RING-HC PROTEIN 1
Gene Name Synonym RING finger protein OsRFPHC-1, RING-HC protein 1, RING-type E3 ubiquitin ligase 348
Protein Name RING-HC PROTEIN 1
Allele
Chromosome No. 3
Explanation Q7XZZ3. one of the two orthologs of Arabidopsis NLA (AtNLA) in rice.
Trait Class Tolerance and resistance - Stress tolerance
Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK103022
MSU ID LOC_Os03g44810.1
LOC_Os03g44810.2
LOC_Os03g44810.3
LOC_Os03g44810.4
RAP ID Os03g0650900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Lu S., Ye J., Li H., He F., Qi Y., Wang T., Wang W., Zheng L.
Plants (Basel) 2023  12(12) 
The Splicing Factor OsSCL26 Regulates Phosphorus Homeostasis in Rice.
Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022  23(1)  154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
Yue W., Ying Y., Wang C., Zhao Y., Dong C., Whelan J., Shou H.
Plant J. 2017   
OsNLA1, a RING-type ubiquitin ligase, maintains phosphate homeostasis in Oryza sativa via degradation of phosphate transporters.
Yang J., Wang L., Mao C., Lin H.
Rice (N Y) 2017  10(1)  52
Characterization of the rice NLA family reveals a key role for OsNLA1 in phosphate homeostasis.
Park Y.C., Kim J.J., Kim D.S., Jang C.S.
Planta 2015  241(5)  1119-29
Rice RING E3 ligase may negatively regulate gamma-ray response to mediate the degradation of photosynthesis-related proteins.
Lim S.D., Hwang J.G., Han A.R., Park Y.C., Lee C., Ok Y.S., Jang C.S.
Plant Mol. Biol. 2014  85(4-5)  365-79
Positive regulation of rice RING E3 ligase OsHIR1 in arsenic and cadmium uptakes.
Lim S.D., Hwang J.G., Jung C.G., Hwang S.G., Moon J.C., Jang C.S.
DNA Res. 2013  20(3)  299-314
Comprehensive Analysis of the Rice RING E3 Ligase Family Reveals Their Functional Diversity in Response to Abiotic stress.
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to gamma radiation( GO:0010332 )
zinc ion binding( GO:0008270 )
protein ubiquitination( GO:0016567 )
ligase activity( GO:0016874 )
Trait Ontology radiation response trait( TO:0000161 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Sep 13, 2023

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