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Basic Information
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CGSNL Gene Symbol
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GL5.2
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Gene Symbol Synonym
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OsRFPH2-24, OsHRZ2, HRZ2, OsRING150, RING150, CLG1, OsCLG1, OsGL5.2
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CGSNL Gene Name
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GRAIN LENGTH 5.2
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Gene Name Synonym
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RING finger protein OsRFPH2-24, RING-H2 protein 24, Haemerythrin motif-containing Really Interesting New Gene (RING)-and Zinc-finger protein 2, Haemerythrin motif-containing RING- and Zinc-finger protein 2, RING-type E3 ubiquitin ligase 150, CHANG LI GENG 1
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Protein Name
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HAEMERYTHRIN MOTIF-CONTAINING RING- AND ZINC-FINGER PROTEIN 2
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Allele
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hrz2-1
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Chromosome No.
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5
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Explanation
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OsHRZ2 negatively regulates responses to Fe deficiency. a RING ubiquitin ligase. a close homolog of Arabidopsis BTS. an Arabidopsis thaliana BRUTUS (BTS) ortholog. putative iron-sensing factor. putative Fe and oxygen/redox state sensor. iron-binding ubiquitin ligase. the causal gene for qGL5.2. GO:1901967: negative regulation of cellular response to iron ion starvation. GO:1990641: response to iron ion starvation. TO:0020089: iron content trait. TO:0006049: iron concentration. TO:0020090: zinc content trait. TO:0006053: zinc concentration. TO:0000975: grain width.
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Trait Class
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Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK068028
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MSU ID
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LOC_Os05g47780.1
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RAP ID
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Os05g0551000
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Bai C., Wang G.J., Feng X.H., Gao Q., Wang W.Q., Xu R., Guo S.J., Shen S.Y., Ma M., Lin W.H., Liu C.M., Li Y., Song X.J.
Nat Commun 2024 15(1) 4300
OsMAPK6 phosphorylation and CLG1 ubiquitylation of GW6a non-additively enhance rice grain size.through stabilization of the substrate.
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Zhang H., Huang D.R., Shen Y., Niu X.J., Fan Y.Y., Zhang Z.H., Zhuang J.Y., Zhu Y.J.
Plants (Basel) 2024 13(17)
<i>GL5.2</i>, a Quantitative Trait Locus for Rice grain shape, Encodes a RING-Type E3 Ubiquitin Ligase.
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Kobayashi T., Maeda K., Suzuki Y., Nishizawa N.K.
Rice (N Y) 2022 15(1) 54
Simultaneous Enhancement of iron Deficiency Tolerance and Iron Accumulation in Rice by Combining the Knockdown of OsHRZ Ubiquitin Ligases with the Introduction of Engineered Ferric-chelate Reductase.
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Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022 23(1) 154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
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Wang S., Sun S., Guo R., Liao W., Shou H.
Genes (Basel) 2021 12(4)
Transcriptomic Profiling of Fe-Responsive lncRNAs and Their Regulatory Mechanism in Rice.
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Wang S., Li L., Ying Y., Wang J., Shao J.F., Yamaji N., Whelan J., Ma J.F., Shou H.
New Phytol. 2020 225(3) 1247-1260
A transcription factor OsbHLH156 regulates Strategy II iron acquisition through localising IRO2 to the nucleus in rice.
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Kobayashi T., Ozu A., Kobayashi S., An G., Jeon J.S., Nishizawa N.K.
Plant Mol. Biol. 2019 101(4-5) 471-486
OsbHLH058 and OsbHLH059 transcription factors positively regulate iron deficiency responses in rice.
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Aung M.S., Kobayashi T., Masuda H., Nishizawa N.K.
Physiol Plant 2018
Rice HRZ ubiquitin ligases are crucial for response to excess iron.
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Andrés-Bordería A., Andrés F., Garcia-Molina A., Perea-García A., Domingo C., Puig S., Peñarrubia L.
Plant Mol. Biol. 2017
Copper and ectopic expression of the Arabidopsis transport protein COPT1 alter iron homeostasis in rice (Oryza sativa L.).
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Kobayashi T., Itai R.N., Senoura T., Oikawa T., Ishimaru Y., Ueda M., Nakanishi H., Nishizawa N.K.
Plant Mol. Biol. 2016 91(4-5) 533-47
Jasmonate signaling is activated in the very early stages of iron deficiency responses in rice roots.
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Kobayashi T.a b, Nakanishi Itai R.c, Nishizawa N.K.b
Rice 2014 7
Iron deficiency responses in rice roots
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Kobayashi T., Nishizawa N.K.
Plant Sci. 2014 224 36-43
Iron sensors and signals in response to iron deficiency.
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Lim S.D., Hwang J.G., Han A.R., Park Y.C., Lee C., Ok Y.S., Jang C.S.
Plant Mol. Biol. 2014 85(4-5) 365-79
Positive regulation of rice RING E3 ligase OsHIR1 in arsenic and cadmium uptakes.
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Lim S.D., Hwang J.G., Jung C.G., Hwang S.G., Moon J.C., Jang C.S.
DNA Res. 2013 20(3) 299-314
Comprehensive Analysis of the Rice RING E3 Ligase Family Reveals Their Functional Diversity in Response to Abiotic stress.
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Kobayashi T., Nagasaka S., Senoura T., Itai R.N., Nakanishi H., Nishizawa N.K.
Nat Commun 2013 4 2792
Iron-binding haemerythrin RING ubiquitin ligases regulate plant iron responses and accumulation.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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zinc ion binding( GO:0008270 )
jasmonic acid mediated signaling pathway( GO:0009867 )
cellular response to iron ion starvation( GO:0010106 )
iron ion binding( GO:0005506 )
response to starvation( GO:0042594 )
iron ion homeostasis( GO:0055072 )
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Trait Ontology
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iron sensitivity( TO:0000224 )
grain size( TO:0000397 )
grain shape( TO:0002730 )
grain length( TO:0000734 )
seed length to width ratio( TO:0000411 )
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Plant Ontology
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root( PO:0009005 )
shoot system( PO:0009006 )
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Related Strains
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Phenotype images
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Last updated
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Dec 10, 2024
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Update info.