Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | MIR444A |
| Gene Symbol Synonym | OsMIR444a, osa-MIR444a, miR444aosa-miR444a osa-miR444a-3p.1 osa-miR444a-3p.2 osa-miR444a-5p |
| CGSNL Gene Name | MICRORNA444A |
| Gene Name Synonym | rice microRNA444a |
| Protein Name | |
| Allele | |
| Chromosome No. | |
| Explanation | miRBASE accession: MI0001719. predicted target(s): MADS-box transcription factors. miR444 targets: MIKC-type MADS-box genes MADS-23, MADS-27a, MADS-27b and MADS-57. GO:1902025: nitrate import. TO:0020094: nitrate content. TO:0020100: nitrate uptake. LM379526 LM380638 LM382870. miR444 in Wang et al. 2016. GO:2000488: positive regulation of brassinosteroid biosynthetic process. GO:1900459: positive regulation of brassinosteroid mediated signaling pathway. GO:2000280: regulation of root development. |
| Trait Class |
Vegetative organ - Root
Tolerance and resistance - Disease resistance Tolerance and resistance - Stress tolerance Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. | - |
| MSU ID | - |
| RAP ID | - |
| Links | - |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| References | |
|
Jiao X., Wang H., Yan J., Kong X., Liu Y., Chu J., Chen X., Fang R., Yan Y.
Plant Physiol. 2020 182(3) 1454-1466 Promotion of BR Biosynthesis by miR444 Is Required for Ammonium-Triggered Inhibition of Root Growth.
|
|
|
Wang H., Jiao X., Kong X., Hamera S., Wu Y., Chen X., Fang R., Yan Y.
Plant Physiol. 2016 170(4) 2365-77 A Signaling Cascade from miR444 to RDR1 in Rice Antiviral RNA Silencing Pathway.
|
|
|
Yan Y., Wang H., Hamera S., Chen X., Fang R.
Plant J. 2014 78(1) 44-55 miR444a has multiple functions in the rice nitrate-signaling pathway.
|
|
|
Guo S., Xu Y., Liu H., Mao Z., Zhang C., Ma Y., Zhang Q., Meng Z., Chong K.
Nat Commun 2013 4 1566 The interaction between OsMADS57 and OsTB1 modulates rice tillering via DWARF14.
|
|
|
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011 23(12) 4185-207 Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
|
|
|
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011 39 D152-D157 miRBase: integrating microRNA annotation and deep-sequencing data
|
|
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
brassinosteroid mediated signaling( GO:0009742 )
brassinosteroid biosynthetic process( GO:0016132 ) response to ammonium ion( GO:0060359 ) mRNA cleavage( GO:0006379 ) RNA-induced silencing complex( GO:0016442 ) micro-ribonucleoprotein complex( GO:0035068 ) gene silencing by miRNA( GO:0035195 ) response to nitrate( GO:0010167 ) cellular response to phosphate starvation( GO:0016036 ) root development( GO:0048364 ) defense response to virus( GO:0051607 ) |
| Trait Ontology |
root development trait( TO:0000656 )
viral disease resistance( TO:0000148 ) root length( TO:0000227 ) leaf angle( TO:0000206 ) internode length( TO:0000145 ) coleoptile length( TO:0001007 ) brassinosteroid content( TO:0002676 ) |
| Plant Ontology |
root( PO:0009005 )
root development stage( PO:0007520 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Nov 15, 2021 | |
