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Basic Information
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CGSNL Gene Symbol
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MIR319A
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Gene Symbol Synonym
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OsmiR319a, Osa-miR319a, osa-MIR319aosa-miR319a osa-miR319a-3p osa-miR319a-3p.2-3p
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CGSNL Gene Name
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MICRORNA319A
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Gene Name Synonym
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rice microRNA319a, MicroRNA319a
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Protein Name
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Allele
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Chromosome No.
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1
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Explanation
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miRBASE accession: MI0001098. predicted target(s): metacaspase. AY551257. LM382867 LM379311. TO:0000820: leaf vein morphology trait. GO:1900366: negative regulation of defense response to insect.
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Trait Class
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Vegetative organ - Leaf
Tolerance and resistance - Disease resistance
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK064418
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MSU ID
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LOC_Os01g46984.1
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RAP ID
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Os01g0659400
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Sun B., Shen Y., Zhu L., Yang X., Liu X., Li D., Zhu M., Miao X., Shi Z.
BMC Biol. 2024 22(1) 68
OsmiR319-OsPCF5 modulate resistance to brown planthopper in rice through association with MYB proteins.
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Huo C., Zhang B., Wang R.
Plant Signal Behav 2022 17(1) 2004035
Research progress on plant noncoding RNAs in response to low-temperature stress.
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Arora K., Rai A.K., Devanna B.N., Dubey H., Narula A., Sharma T.R.
Physiol Mol Biol Plants 2021 27(3) 633-647
Deciphering the role of microRNAs during <i>Pi54</i> gene mediated <i>Magnaporthe oryzae</i> resistance response in rice.
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Xu P., Ali A., Han B., Wu X.
Front Plant Sci 2018 9 1528
Current Advances in Molecular Basis and Mechanisms Regulating Leaf Morphology in Rice.
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Devi S.J., Madhav M.S., Kumar G.R., Goel A.K., Umakanth B., Jahnavi B., Viraktamath B.C.
Gene 2013 531(1) 15-22
Identification of abiotic stress miRNA transcription factor binding motifs (TFBMs) in rice.
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Zhou M., Li D., Li Z., Hu Q., Yang C., Zhu L., Luo H.
Plant Physiol. 2013 161(3) 1375-91
Constitutive expression of a miR319 gene alters plant development and enhances salt and drought tolerance in transgenic creeping bentgrass.
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Yang C., Li D., Mao D., Liu X., Ji C., Li X., Zhao X., Cheng Z., Chen C., Zhu L.
Plant Cell Environ. 2013 36(12) 2207-18
Overexpression of microRNA319 impacts leaf morphogenesis and leads to enhanced cold tolerance in rice (Oryza sativa L.).
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Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011 39 D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
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Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011 23(12) 4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
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Li,Y., Li,W. and Jin,Y.X.
Acta Biochim. Biophys. Sin. (Shanghai) 2005 37 (2) 75-87
Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
micro-ribonucleoprotein complex( GO:0035068 )
gene silencing by miRNA( GO:0035195 )
leaf morphogenesis( GO:0009965 )
response to cold( GO:0009409 )
defense response to fungus( GO:0050832 )
defense response to insect( GO:0002213 )
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Trait Ontology
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leaf width( TO:0000370 )
cold tolerance( TO:0000303 )
blast disease( TO:0000074 )
brown planthopper resistance( TO:0000424 )
leaf length to width ratio( TO:0000542 )
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Sep 6, 2024
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Update info.