|
Basic Information
|
|
CGSNL Gene Symbol
|
PL
|
|
Gene Symbol Synonym
|
OsMYB55, OsMYB-2, MYB55, MYB-2, OsPL, Os2R_MYB60, 2R_MYB60, MYB2-70, OsMYB2-70, OsC1-PLSr, C1-PLSr
|
|
CGSNL Gene Name
|
PURPLE LEAF
|
|
Gene Name Synonym
|
R2R3-MYB Transcription Factor 55, R2R3-MYB Transcription Factor OsMYB55, purple leaf, R2R3-MYB Transcription Factor 60, R2R3-MYB transcription factor 2-70
|
|
Protein Name
|
|
|
Allele
|
pl, pl1, pl2, pl3
|
|
Chromosome No.
|
5
|
|
Explanation
|
R2R3-MYB. TO:0020106: Indole-3-acetic acid content.
|
|
Trait Class
|
Vegetative organ - Leaf
Coloration - Anthocyanin
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Other
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK108452
|
|
MSU ID
|
LOC_Os05g48010.1
|
|
RAP ID
|
Os05g0553400
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Wang J., Sun S., Fang W., Fu X., Cao F., Liu S.
Plants (Basel) 2025 14(14)
Gamma-Aminobutyric Acid: A Novel Biomolecule to Improve Plant Resistance and Fruit Quality.
|
|
Peng W., Zhang Y., Xie H., Yu Y., Zhu M.
Front Plant Sci 2025 16 1668800
Research progress on the synergistic regulation of MYB transcription factor-mediated developmental plasticity and stress responses in rice.
|
|
ElShamey E.A., Yang X., Yang J., Pu X., Yang L., Ke C., Zeng Y.
Int J Mol Sci 2025 26(13)
Occurrence, Biosynthesis, and Health Benefits of Anthocyanins in Rice and Barley.
|
|
Zhang H.C., Gong Y.H., Tao T., Lu S., Zhou W.Y., Xia H., Zhang X.Y., Yang Q.Q., Zhang M.Q., Hong L.M., Guo Q.Q., Ren X.Z., Yang Z.D., Cai X.L., Ren D.Y., Gao J.P., Jin S.K., Leng Y.J.
BMC Genomics 2024 25(1) 797
Genome-wide identification of R2R3-MYB transcription factor subfamily genes involved in salt stress in rice (Oryza sativa L.).
|
|
Kang L., Teng Y., Cen Q., Fang Y., Tian Q., Zhang X., Wang H., Zhang X., Xue D.
Plants (Basel) 2022 11(15)
Genome-Wide Identification of R2R3-MYB Transcription Factor and Expression Analysis under Abiotic Stress in Rice.
|
|
Mohanty B.
Front Genet 2021 12 639654
Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
|
|
Xu R., Pan R., Zhang Y., Feng Y., Nath U.K., Gan Y., Shi C., Akhter D.
Int J Mol Sci 2021 22(18)
RNA-Seq-Based Profiling of <i>pl</i> Mutant Reveals Transcriptional Regulation of Anthocyanin Biosynthesis in Rice (<i>Oryza sativa</i> L.).
|
|
Akhter D., Qin R., Nath U.K., Eshag J., Jin X., Shi C.
Gene 2019 699 62-72
A rice gene, OsPL, encoding a MYB family transcription factor confers anthocyanin synthesis, heat stress response and hormonal signaling.
|
|
Ogawa S., Miyamoto K., Nemoto K., Sawasaki T., Yamane H., Nojiri H., Okada K.
Sci Rep 2017 7 40175
OsMYC2, an essential factor for JA-inductive sakuranetin production in rice, interacts with MYC2-like proteins that enhance its transactivation ability.
|
|
Gong L., Chen W., Gao Y., Liu X., Zhang H., Xu C., Yu S., Zhang Q., Luo J.
Proc. Natl. Acad. Sci. U.S.A. 2013 110(50) 20320-5
Genetic analysis of the metabolome exemplified using a rice population.
|
|
Pandey D.M., Kim S.R.
Journal of Plant Biology 2012 55 489-497
Identification and expression analysis of hypoxia stress inducible CCCH-type zinc finger protein genes in rice
|
|
El-Kereamy A., Bi Y.M., Ranathunge K., Beatty P.H., Good A.G., Rothstein S.J.
PLoS ONE 2012 7(12) e52030
The rice R2R3-MYB transcription factor OsMYB55 is involved in the tolerance to high temperature and modulates amino acid metabolism.
|
|
Jia L., Michael T Clegg, Jiang T.
Plant Physiol. 2004 134(2) 575-85
Evolutionary dynamics of the DNA-binding domains in putative R2R3-MYB genes identified from rice subspecies indica and japonica genomes.
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
DNA binding( GO:0003677 )
chromatin binding( GO:0003682 )
auxin mediated signaling pathway( GO:0009734 )
jasmonic acid mediated signaling pathway( GO:0009867 )
abscisic acid mediated signaling( GO:0009738 )
response to deep water( GO:0030912 )
anthocyanin biosynthetic process( GO:0009718 )
response to heat( GO:0009408 )
hormone-mediated signaling( GO:0009755 )
leaf senescence( GO:0010150 )
regulation of anthocyanin biosynthetic process( GO:0031540 )
nucleus( GO:0005634 )
chloroplast organization( GO:0009658 )
|
|
Trait Ontology
|
heat tolerance( TO:0000259 )
leaf color( TO:0000326 )
leaf sheath color( TO:0002724 )
leaf senescence( TO:0000249 )
chloroplast development trait( TO:0002715 )
chlorophyll content( TO:0000495 )
anthocyanin content( TO:0000071 )
abscisic acid content( TO:0002667 )
jasmonic acid content( TO:0002668 )
auxin content( TO:0002672 )
submergence tolerance( TO:0000524 )
grain length( TO:0000734 )
filled grain number( TO:0000447 )
1000-dehulled grain weight( TO:0000592 )
|
|
Plant Ontology
|
4 leaf senescence stage( PO:0001054 )
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Jan 12, 2026
|
Update info.