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Basic Information
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CGSNL Gene Symbol
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BBX17
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Gene Symbol Synonym
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OsBBX17, OsL, OsCCT20, CCT20, OsCOL16, COL16
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CGSNL Gene Name
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B-BOX-CONTAINING PROTEIN 17
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Gene Name Synonym
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B-box-containing protein 17, CCT domain-containing gene 20, CCT (CO, CO-LIKE and TOC1) domain protein 20, CCT domain protein 20, CONSTANS-like protein 16
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Protein Name
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B-BOX-CONTAINING PROTEIN 17
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Allele
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oscol16, osbbx17-KO, osbbx17-KO1, osbbx17-KO2
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Chromosome No.
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6
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Explanation
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an Arabidopsis COL16 homolog. GO:2000028: regulation of photoperiodism, flowering. GO:0099402: plant organ development.
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Trait Class
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Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Character as QTL - Germination
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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LOC_Os06g15330.1
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RAP ID
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Os06g0264200
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Shen T., Xu F., Chen D., Yan R., Wang Q., Li K., Zhang G., Ni L., Jiang M.
New Phytol. 2024 241(5) 2158-2175
A B-box transcription factor OsBBX17 regulates saline-alkaline tolerance through the MAPK cascade pathway in rice.
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Naithani S., Mohanty B., Elser J., D'Eustachio P., Jaiswal P.
Plants (Basel) 2023 12(11)
Biocuration of a Transcription Factors Network Involved in Submergence Tolerance during Seed Germination and Coleoptile Elongation in Rice (<i>Oryza sativa</i>).
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Zhang J., Fan X., Hu Y., Zhou X., He Q., Liang L., Xing Y.
J Integr Plant Biol 2020
Global analysis of CCT family knockout mutants identifies four genes involved in regulating heading date in rice.
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Shalmani A., Jing X.Q., Shi Y., Muhammad I., Zhou M.R., Wei X.Y., Chen Q.Q., Li W.Q., Liu W.T., Chen K.M.
BMC Genomics 2019 20(1) 27
Characterization of B-BOX gene family and their expression profiles under hormonal, abiotic and metal stresses in Poaceae plants.
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Wu W., Zheng X.M., Chen D., Zhang Y., Ma W., Zhang H., Sun L., Yang Z., Zhao C., Zhan X., Shen X., Yu P., Fu Y., Zhu S., Cao L., Cheng S.
Plant Sci. 2017 260 60-69
OsCOL16, encoding a CONSTANS-like protein, represses flowering by up-regulating Ghd7 expression in rice.
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Zhang L., Li Q., Dong H., He Q., Liang L., Tan C., Han Z., Yao W., Li G., Zhao H., Xie W., Xing Y.
Sci Rep 2015 5 7663
Three CCT domain-containing genes were identified to regulate heading date by candidate gene-based association mapping and transformation in rice.
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Huang J., Zhao X., Weng X., Wang L., Xie W.
PLoS ONE 2012 7(10) e48242
The rice B-box zinc finger gene family: genomic identification, characterization, expression profiling and diurnal analysis.
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Cockram J., Thiel T., Steuernagel B., Stein N., Taudien S., Paul C Bailey, Donal M O'Sullivan
PLoS ONE 2012 7(9) e45307
Genome dynamics explain the evolution of flowering time CCT domain gene families in the Poaceae.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to oxidative stress( GO:0006979 )
negative regulation of transcription, DNA-dependent( GO:0045892 )
potassium ion homeostasis( GO:0055075 )
sodium ion homeostasis( GO:0055078 )
DNA binding( GO:0003677 )
MAPKKK cascade( GO:0000165 )
response to alkalinity( GO:0010446 )
seed germination( GO:0009845 )
response to flooding( GO:0009413 )
response to cadmium ion( GO:0046686 )
response to nickel ion( GO:0010045 )
response to iron ion( GO:0010039 )
response to gibberellin stimulus( GO:0009739 )
response to salicylic acid stimulus( GO:0009751 )
response to jasmonic acid stimulus( GO:0009753 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
intracellular( GO:0005622 )
zinc ion binding( GO:0008270 )
negative regulation of long-day photoperiodism, flowering( GO:0048579 )
negative regulation of short-day photoperiodism, flowering( GO:0048577 )
circadian rhythm( GO:0007623 )
response to salt stress( GO:0009651 )
response to cold( GO:0009409 )
response to water deprivation( GO:0009414 )
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Trait Ontology
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plant height( TO:0000207 )
grain yield( TO:0000396 )
salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 )
drought tolerance( TO:0000276 )
gibberellic acid sensitivity( TO:0000166 )
jasmonic acid sensitivity( TO:0000172 )
iron sensitivity( TO:0000224 )
submergence tolerance( TO:0000524 )
alkali sensitivity( TO:0000481 )
sodium to potassium content ratio( TO:0000525 )
oxidative stress( TO:0002657 )
hydrogen peroxide content( TO:0000605 )
sodium content( TO:0000608 )
relative chlorophyll content( TO:0001016 )
potassium content( TO:0000609 )
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Plant Ontology
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shoot system( PO:0009006 )
leaf sheath( PO:0020104 )
leaf( PO:0025034 )
0 seed germination stage( PO:0007057 )
coleoptile emergence stage( PO:0007045 )
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Related Strains
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Phenotype images
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Last updated
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Feb 20, 2026
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Update info.