Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym OsBBX12, OsC, OsCCT16, BBX12, CCT16
CGSNL Gene Name _
Gene Name Synonym B-box-containing protein 12, CCT domain-containing gene 16, CCT (CO, CO-LIKE and TOC1) domain protein 16, CCT domain protein 16, CONSTANS-like protein, CONSTANS-like gene C
Protein Name
Allele
Chromosome No. 4
Explanation AL606627.
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK059443
AK121024
MSU ID LOC_Os04g42020.1
RAP ID Os04g0497700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Shalmani A., Jing X.Q., Shi Y., Muhammad I., Zhou M.R., Wei X.Y., Chen Q.Q., Li W.Q., Liu W.T., Chen K.M.
BMC Genomics 2019  20(1)  27
Characterization of B-BOX gene family and their expression profiles under hormonal, abiotic and metal stresses in Poaceae plants.
Wang J., Wang R., Wang Y., Zhang L., Zhang L., Xu Y., Yao S.
Plant J. 2017   
SHORT and Solid Culm/RFL/APO2 for culm development in rice.
Zhang L., Li Q., Dong H., He Q., Liang L., Tan C., Han Z., Yao W., Li G., Zhao H., Xie W., Xing Y.
Sci Rep 2015  5  7663
Three CCT domain-containing genes were identified to regulate heading date by candidate gene-based association mapping and transformation in rice.
Huang J., Zhao X., Weng X., Wang L., Xie W.
PLoS ONE 2012  7(10)  e48242
The rice B-box zinc finger gene family: genomic identification, characterization, expression profiling and diurnal analysis.
Cockram J., Thiel T., Steuernagel B., Stein N., Taudien S., Paul C Bailey, Donal M O'Sullivan
PLoS ONE 2012  7(9)  e45307
Genome dynamics explain the evolution of flowering time CCT domain gene families in the Poaceae.
Griffiths S., Roy P Dunford, Coupland G., David A Laurie
Plant Physiol. 2003  131(4)  1855-67
The evolution of CONSTANS-like gene families in barley, rice, and Arabidopsis.
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DB Reference
Gramene ID -
Ontologies
Gene Ontology response to cadmium ion( GO:0046686 )
response to nickel ion( GO:0010045 )
response to iron ion( GO:0010039 )
response to jasmonic acid stimulus( GO:0009753 )
response to salicylic acid stimulus( GO:0009751 )
response to water deprivation( GO:0009414 )
response to cold( GO:0009409 )
response to salt stress( GO:0009651 )
intracellular( GO:0005622 )
zinc ion binding( GO:0008270 )
Trait Ontology salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 )
drought tolerance( TO:0000276 )
jasmonic acid sensitivity( TO:0000172 )
iron sensitivity( TO:0000224 )
Plant Ontology seed( PO:0009010 )
shoot system( PO:0009006 )
leaf sheath( PO:0020104 )
leaf( PO:0025034 )
flowering stage( PO:0007616 )
anther( PO:0009066 )
inflorescence( PO:0009049 )
Related Strains
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Phenotype images
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Last updated
Jul 29, 2019


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