Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym OsBBX8, OsK, OsCCT09, OsGhd2, OsK/Ghd2, BBX8, CCT09, Ghd2
CGSNL Gene Name _
Gene Name Synonym B-box-containing protein 8, CCT domain-containing gene 9, CCT (CO, CO-LIKE and TOC1) domain protein 9, CCT domain protein 9, "Grain number, plant height, and heading date2", CONSTANS-like 1 protein
Protein Name
Allele ghd2
Chromosome No. 2
Explanation a CONSTANS-like gene. GO:1900055: regulation of leaf senescence.
Trait Class Vegetative organ - Leaf
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK072346
AK120314
MSU ID LOC_Os02g49880.1
RAP ID Os02g0731700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
-
Map
Locate(cM)
Link map Classical linkage map
References
Shalmani A., Jing X.Q., Shi Y., Muhammad I., Zhou M.R., Wei X.Y., Chen Q.Q., Li W.Q., Liu W.T., Chen K.M.
BMC Genomics 2019  20(1)  27
Characterization of B-BOX gene family and their expression profiles under hormonal, abiotic and metal stresses in Poaceae plants.
Wang J., Wang R., Wang Y., Zhang L., Zhang L., Xu Y., Yao S.
Plant J. 2017   
SHORT and Solid Culm/RFL/APO2 for culm development in rice.
Liu J., Shen J., Xu Y., Li X., Xiao J., Xiong L.
J. Exp. Bot. 2016  67(19)  5785-5798
Ghd2, a CONSTANS-like gene, confers drought sensitivity through regulation of senescence in rice.
Zhang L., Li Q., Dong H., He Q., Liang L., Tan C., Han Z., Yao W., Li G., Zhao H., Xie W., Xing Y.
Sci Rep 2015  5  7663
Three CCT domain-containing genes were identified to regulate heading date by candidate gene-based association mapping and transformation in rice.
Huang J., Zhao X., Weng X., Wang L., Xie W.
PLoS ONE 2012  7(10)  e48242
The rice B-box zinc finger gene family: genomic identification, characterization, expression profiling and diurnal analysis.
Cockram J., Thiel T., Steuernagel B., Stein N., Taudien S., Paul C Bailey, Donal M O'Sullivan
PLoS ONE 2012  7(9)  e45307
Genome dynamics explain the evolution of flowering time CCT domain gene families in the Poaceae.
TextPresso Search Search textpresso for _ ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to cadmium ion( GO:0046686 )
response to nickel ion( GO:0010045 )
response to iron ion( GO:0010039 )
response to gibberellin stimulus( GO:0009739 )
response to jasmonic acid stimulus( GO:0009753 )
response to cold( GO:0009409 )
response to salt stress( GO:0009651 )
response to water deprivation( GO:0009414 )
leaf senescence( GO:0010150 )
Trait Ontology drought tolerance( TO:0000276 )
leaf senescence( TO:0000249 )
salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 )
jasmonic acid sensitivity( TO:0000172 )
gibberellic acid sensitivity( TO:0000166 )
iron sensitivity( TO:0000224 )
Plant Ontology 4 leaf senescence stage( PO:0001054 )
leaf( PO:0025034 )
shoot system( PO:0009006 )
leaf sheath( PO:0020104 )
flowering stage( PO:0007616 )
Related Strains
-
Phenotype images
-
Last updated
Jul 29, 2019


Login ID
Password
/rice/oryzabase