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Basic Information
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CGSNL Gene Symbol
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GH3-2
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Gene Symbol Synonym
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OsGH3-2, OsGH3.2, GH3.2
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CGSNL Gene Name
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GRETCHENHAGEN 3-2
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Gene Name Synonym
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OsGRETCHENHAGEN3-2, GRETCHENHAGEN3-2, GRETCHEN HAGEN3-2
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Protein Name
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Allele
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Osgh3.2, Osgh3.2-1, Osgh3.2-2
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Chromosome No.
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1
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Explanation
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P0C0M2. GU001814. IAA-conjugating enzyme. TO:0000931: seed quality trait. TO:0000949: seedling growth and development trait. GO:0090351: seedling development. TO:0001058: root system depth. GO:1901601: strigolactone biosynthetic process.
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Trait Class
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Biochemical character
Tolerance and resistance - Disease resistance
Vegetative organ - Leaf
Reproductive organ - panicle
Tolerance and resistance - Stress tolerance
Character as QTL - Germination
Vegetative organ - Culm
Seed - Physiological traits - Longevity
Seed - Physiological traits
Vegetative organ - Root
Seed - Morphological traits - Grain shape
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK102809
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MSU ID
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LOC_Os01g55940.1
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RAP ID
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Os01g0764800
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Kim J.S., Chae S., Jo J.E., Kim K.D., Song S.I., Park S.H., Choi S.B., Jun K.M., Shim S.H., Jeon J.S., Lee G.S., Kim Y.K.
Mol. Cells 2024 47(8) 100093
osmyb14, an R2R3-MYB transcription factor, regulates plant height through the control of hormone metabolism in rice.
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Liu C.C., Liu Y.N., Cheng J.F., Guo R., Tian L., Wang B.
Front Plant Sci 2022 13 853435
Dual Roles of <i>OsGH3.2</i> in Modulating Rice Root Morphology and Affecting Arbuscular Mycorrhizal Symbiosis.
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Zhang L.L., Huang Y.Y., Zheng Y.P., Liu X.X., Zhou S.X., Yang X.M., Liu S.L., Li Y., Li J.L., Zhao S.L., Wang H., Ji Y.P., Zhang J.W., Pu M., Zhao Z.X., Fan J., Wang W.M.
Plant J. 2022 110(1) 166-178
Osa-miR535 targets SQUAMOSA promoter binding protein-like 4 to regulate blast disease resistance in rice.
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Li Y., Liu P., Mei L., Jiang G., Lv Q., Zhai W., Li C.
Front Plant Sci 2022 13 1065253
Knockout of a papain-like cysteine protease gene <i>OCP</i> enhances blast resistance in rice.
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Wang Y., Wang Y., Yang R., Wang F., Fu J., Yang W., Bai T., Wang S., Yin H.
J Zhejiang Univ Sci B 2021 22(12) 1002-1021
Effects of gibberellin priming on seedling emergence and transcripts involved in mesocotyl elongation in rice under deep direct-seeding conditions.
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Xu X., E Z., Zhang D., Yun Q., Zhou Y., Niu B., Chen C.
Plant Physiol. 2021 185(3) 934-950
OsYUC11-mediated auxin biosynthesis is essential for endosperm development of rice.
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Wu F., Luo X., Wang L., Wei Y., Li J., Xie H., Zhang J., Xie G.
Plants (Basel) 2021 10(4)
Genome-Wide Association Study Reveals the QTLs for Seed Storability in World Rice Core Collections.
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Yuan Z., Fan K., Wang Y., Tian L., Zhang C., Sun W., He H., Yu S.
Plant Physiol. 2021
OsGRETCHENHAGEN3-2 modulates rice seed storability via accumulation of abscisic acid and protective substances.
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Qin Q., Li G., Jin L., Huang Y., Wang Y., Wei C., Xu Z., Yang Z., Wang H., Li Y.
PLoS Pathog. 2020 16(12) e1009118
Auxin response factors (ARFs) differentially regulate rice antiviral immune response against rice dwarf virus.
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Song M., Fan X., Chen J., Qu H., Luo L., Xu G.
Plant Physiol. 2020
OsNAR2.1 interaction with OsNIT1 and OsNIT2 functions in root-growth responses to nitrate and ammonium.
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Zhang H., Tan X., Li L., He Y., Hong G., Li J., Lin L., Cheng Y., Yan F., Chen J., Sun Z.
Mol. Plant Pathol. 2019 20(8) 1093-1104
Suppression of auxin signalling promotes rice susceptibility to Rice black streaked dwarf virus infection.
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de Freitas GM., Thomas J., Liyanage R., Lay J.O., Basu S., Ramegowda V., do Amaral MN., Benitez L.C., Bolacel Braga EJ., Pereira A.
PLoS ONE 2019 14(6) e0218019
cold tolerance response mechanisms revealed through comparative analysis of gene and protein expression in multiple rice genotypes.
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Kong W., Zhong H., Deng X., Gautam M., Gong Z., Zhang Y., Zhao G., Liu C., Li Y.
Plants (Basel) 2019 8(2)
Evolutionary Analysis of <i>GH3</i> Genes in Six <i>Oryza</i> Species/Subspecies and Their Expression under Salinity Stress in <i>Oryza sativa</i> ssp. <i>japonica</i>.
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Liu Q., Ting-Ting Chen, Dong-Wang Xiao, Shu-Man Zhao, Ji-Shan Lin, Wang T., Yan-Jie Li, Bing-Kai Hou
Rice (N Y) 2019 12(1) 92
OsIAGT1 Is a Glucosyltransferase Gene Involved in the Glucose Conjugation of Auxins in Rice.
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Chen S.H., Zhou L.J., Xu P., Xue H.W.
PLoS Genet. 2018 14(11) e1007829
SPOC domain-containing protein Leaf inclination3 interacts with LIP1 to regulate rice leaf inclination through auxin signaling.
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Yang J., Yuan Z., Meng Q., Huang G., Périn C., Bureau C., Meunier A.C., Ingouff M., Bennett M.J., Liang W., Zhang D.
Front Plant Sci 2017 8 256
Dynamic Regulation of Auxin Response during Rice Development Revealed by Newly Established Hormone Biosensor Markers.
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Ma X., Feng F., Wei H., Mei H., Xu K., Chen S., Li T., Liang X., Liu H., Luo L.
Front Plant Sci 2016 7 1801
Genome-Wide Association Study for plant height and grain yield in Rice under Contrasting Moisture Regimes.
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Liu X., Zhou S., Wang W., Ye Y., Zhao Y., Xu Q., Zhou C., Tan F., Cheng S., Zhou D.X.
Plant Cell 2015 27(5) 1428-44
Regulation of histone methylation and reprogramming of gene expression in the rice inflorescence meristem.
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Zhou Y., Liu L., Huang W., Yuan M., Zhou F., Li X., Lin Y.
PLoS ONE 2014 9(4) e94210
Overexpression of OsSWEET5 in Rice Causes Growth Retardation and Precocious Senescence.
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Du H., Wu N., Fu J., Wang S., Li X., Xiao J., Xiong L.
J. Exp. Bot. 2012 63(18) 6467-80
A GH3 family member, OsGH3-2, modulates auxin and abscisic acid levels and differentially affects drought and cold tolerance in rice.
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Fu J., Liu H., Li Y., Yu H., Li X., Xiao J., Wang S.
Plant Physiol. 2011 155(1) 589-602
Manipulating broad-spectrum disease resistance by suppressing pathogen-induced auxin accumulation in rice.
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Jain M., Kaur N., Akhilesh K Tyagi, Jitendra P Khurana
Funct. Integr. Genomics 2006 6(1) 36-46
The auxin-responsive GH3 gene family in rice (Oryza sativa).
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Ji Hyun Yang, So Jeong Han, Eun Kyung Yoon, Woo Sung Lee
Nucleic Acids Res. 2006 34(6) 1892-9
'Evidence of an auxin signal pathway, MicroRNA167-ARF8-GH3, and its response to exogenous auxin in cultured rice cells'.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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inflorescence development( GO:0010229 )
root development( GO:0048364 )
response to symbiotic fungus( GO:0009610 )
indole-3-acetic acid amido synthetase activity( GO:0010279 )
response to auxin stimulus( GO:0009733 )
cytoplasm( GO:0005737 )
auxin homeostasis( GO:0010252 )
defense response to fungus( GO:0050832 )
response to gibberellin stimulus( GO:0009739 )
internode patterning( GO:0080006 )
indoleacetic acid metabolic process( GO:0009683 )
acid-amino acid ligase activity( GO:0016881 )
response to light stimulus( GO:0009416 )
negative regulation of auxin mediated signaling pathway( GO:0010930 )
response to cold( GO:0009409 )
response to salt stress( GO:0009651 )
defense response to virus( GO:0051607 )
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Trait Ontology
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auxin content( TO:0002672 )
plant height( TO:0000207 )
auxin sensitivity( TO:0000163 )
leaf angle( TO:0000206 )
leaf length( TO:0000135 )
panicle size( TO:0006032 )
internode length( TO:0000145 )
salt tolerance( TO:0006001 )
seed longevity( TO:0000435 )
seed viability( TO:0000345 )
abscisic acid content( TO:0002667 )
mesocotyl length( TO:0000544 )
blast disease( TO:0000074 )
cold tolerance( TO:0000303 )
black streak dwarf virus resistance( TO:0000020 )
gibberellic acid sensitivity( TO:0000166 )
root development trait( TO:0000656 )
inflorescence development trait( TO:0000621 )
grain length( TO:0000734 )
root length( TO:0000227 )
crown root number( TO:0002685 )
lateral root number( TO:0001013 )
tryptophan content( TO:0002674 )
panicle length( TO:0000040 )
primary branch number( TO:0000547 )
secondary branch number( TO:0000557 )
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Plant Ontology
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anther( PO:0009066 )
inflorescence( PO:0009049 )
seed( PO:0009010 )
root( PO:0009005 )
lateral root( PO:0020121 )
root cortex( PO:0000258 )
root development stage( PO:0007520 )
inflorescence development stage( PO:0001083 )
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Related Strains
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Phenotype images
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Last updated
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Nov 15, 2024
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Update info.