Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | RAD51D |
| Gene Symbol Synonym | OsRAD51D, OsRad51D, OsRAD51D.1, OsRAD51D.2, OsRAD51D.3 |
| CGSNL Gene Name | DNA REPAIR PROTEIN RAD51D |
| Gene Name Synonym | DNA repair protein RAD51D |
| Protein Name | DNA REPAIR PROTEIN RAD51D |
| Allele | osrad51d, rad51d, Osrad51d, Osrad51d-1, Osrad51d-2 |
| Chromosome No. | 9 |
| Explanation | homologous recombination (HR)-related gene. KJ472480, KJ472481, KJ472482. TO:0000862: floral organ anatomy and morphology trait. GO:1904975: response to bleomycin. GO:0035825: homologous recombination. |
| Trait Class |
Reproductive organ - Pollination, fertilization, fertility - Sterility
Tolerance and resistance - Stress tolerance Biochemical character Reproductive organ - Pollination, fertilization, fertility - Meiosis Reproductive organ - Spikelet, flower, glume, awn |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK241825
|
| MSU ID |
LOC_Os09g01680.1
LOC_Os09g01680.2 LOC_Os09g01680.3 |
| RAP ID |
Os09g0104200 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Zhang F., Shen Y., Miao C., Cao Y., Shi W., Du G., Tang D., Li Y., Luo Q., Cheng Z.
New Phytol. 2020 227(3) 824-839 OsRAD51D promotes homologous pairing and recombination by preventing nonhomologous interactions in rice meiosis.
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Wu J., Chen Y., Lin H., Chen Y., Yu H., Lu Z., Li X., Zhou H., Chen Z., Liu X.
Int J Mol Sci 2020 21(19) Comparative Cytological and Transcriptome Analysis Revealed the Normal pollen Development Process and Up-Regulation of Fertility-Related Genes in Newly Developed Tetraploid Rice.
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Xu Z., Zhang J., Xu M., Ji W., Yu M., Tao Y., Gong Z., Gu M., Yu H.
Plant J. 2018 95(2) 282-295 Rice rad51 paralogs play essential roles in somatic homologous recombination for DNA repair.
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Byun M.Y., Kim W.T.
Plant J. 2014 79(2) 256-69 Suppression of OsRAD51D results in defects in reproductive development in rice (Oryza sativa L.).
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Nishizawa-Yokoi A., Nonaka S., Saika H., Kwon Y.I., Osakabe K., Toki S.
New Phytol. 2012 196(4) 1048-59 Suppression of Ku70/80 or Lig4 leads to decreased stable transformation and enhanced homologous recombination in rice.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
meiosis( GO:0007126 )
telomere maintenance( GO:0000723 ) reproductive process( GO:0022414 ) double-strand break repair( GO:0006302 ) double-strand break repair via synthesis-dependent strand annealing( GO:0045003 ) double-strand break repair via single-strand annealing( GO:0045002 ) response to gamma radiation( GO:0010332 ) synapsis( GO:0007129 ) synaptonemal complex assembly( GO:0007130 ) |
| Trait Ontology |
sterility related trait( TO:0000485 )
lemma and palea anatomy and morphology trait( TO:0000079 ) stamen number( TO:0000225 ) radiation response trait( TO:0000161 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Nov 25, 2021 | |
