Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol BRCA2
Gene Symbol Synonym OsBRCA2
CGSNL Gene Name BREAST CANCER 2
Gene Name Synonym BRCA2 orthologue
Protein Name
Allele osbrca2, osbrca2-1, osbrca2-2, osbrca2-3, osbrca2-4
Chromosome No. 1
Explanation homologous recombination (HR)-related gene. the rice orthologue of human BRCA2. GO:0035825: homologous recombination.
Trait Class Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Female sterility
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Expression
Sequence/Locus
cDNA Accession No. AK064137
MSU ID LOC_Os01g07110.1
RAP ID Os01g0164800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Liu X., Cao Y., Du G., Zhang C., Xu M., Cheng Z., Shen Y., Yu H.
Int J Mol Sci 2022  23(17) 
OsRAD51 Plays a Vital Role in Promoting Homologous Recombination in Rice Meiosis.
Fu R., Wang C., Shen H., Zhang J., Higgins J.D., Liang W.
Front Plant Sci 2020  11  600820
Rice OsBRCA2 Is Required for DNA Double-Strand Break Repair in Meiotic Cells.
Nishizawa-Yokoi A., Nonaka S., Saika H., Kwon Y.I., Osakabe K., Toki S.
New Phytol. 2012  196(4)  1048-59
Suppression of Ku70/80 or Lig4 leads to decreased stable transformation and enhanced homologous recombination in rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology double-strand break repair( GO:0006302 )
synaptonemal complex assembly( GO:0007130 )
synapsis( GO:0007129 )
leptotene( GO:0000237 )
zygotene( GO:0000238 )
DNA recombination( GO:0006310 )
meiotic cell cycle( GO:0051321 )
Trait Ontology female sterility( TO:0000358 )
male sterility( TO:0000437 )
meiotic cell cycle trait( TO:0000729 )
Plant Ontology leaf( PO:0025034 )
shoot system( PO:0009006 )
root( PO:0009005 )
glume( PO:0009039 )
anther( PO:0009066 )
Related Strains
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Phenotype images
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Last updated
Dec 20, 2022

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