Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym IBF1, OsFBX310, FBX310, OsFBX310, FBX310
CGSNL Gene Name _
Gene Name Synonym inhibitor for brown furrows1, F-box protein 310, F-box-type E3 ubiquitin ligase X310
Protein Name
Allele ibf1, ibf1-1, ibf1-2
Chromosome No. 9
Explanation LOC_Os09g12150.a kelch repeat-containing F-box protein.
Trait Class Coloration - Others
Expression
Sequence/Locus
cDNA Accession No. AK070984
MSU ID LOC_Os09g12150.1
RAP ID Os09g0292900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022  23(1)  154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
Zhao Q., Feng Q., Lu H., Li Y., Wang A., Tian Q., Zhan Q., Lu Y., Zhang L., Huang T., Wang Y., Fan D., Zhao Y., Wang Z., Zhou C., Chen J., Zhu C., Li W., Weng Q., Xu Q., Wang Z.X., Wei X., Han B., Huang X.
Nat. Genet. 2018  50(2)  278-284
Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice.
Shao T., Qian Q., Tang D., Chen J., Li M., Cheng Z., Luo Q.
Theoretical and Applied Genetics 2012  125  381-390
A novel gene ibf1 is required for the inhibition of brown pigment deposition in rice hull furrows
Huang X., Zhao Y., Wei X., Li C., Wang A., Zhao Q., Li W., Guo Y., Deng L., Zhu C., Fan D., Lu Y., Weng Q., Liu K., Zhou T., Jing Y., Si L., Dong G., Huang T., Lu T., Feng Q., Qian Q., Li J., Han B.
Nat. Genet. 2012  44(1)  32-9
Genome-wide association study of flowering time and grain yield traits in a worldwide collection of rice germplasm.
Xu G., Ma H., Nei M., Kong H.
Proc. Natl. Acad. Sci. U.S.A. 2009  106(3)  835-40
Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification.
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP.
Plant Physiol. 2007  143(4)  1467-1483
F-Box Proteins in Rice. Genome-Wide Analysis, Classification, Temporal and Spatial Gene Expression during Panicle and Seed Development, and Regulation by Light and Abiotic Stress.
DB Reference
Gramene ID -
Ontologies
Gene Ontology -
Trait Ontology -
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Feb 1, 2023

/rice/oryzabase