Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | DDF1 |
| Gene Symbol Synonym | OsDDF1 |
| CGSNL Gene Name | DWARF AND DEFORMED FLOWER 1 |
| Gene Name Synonym | Dwarf and deformed flower 1, dwarf and deformed flower 1-1 |
| Protein Name | |
| Allele | ddf1-1 |
| Chromosome No. | 6 |
| Explanation | an F-box protein. DDF1 was preliminarily mapped in a region between markers RM588 and RM587 on chromosome 6 with the genetic distances of 3.8 cM and 2.4 cM to the two markers, respectively. GO:0061458: reproductive system development. TO:0000756: stem internode morphology trait. TO:0000821: leaf vein size. TO:0000820: leaf vein morphology trait. TO:0000862: floral organ morphology trait. TO:1000024: palea morphology trait. |
| Trait Class |
Vegetative organ - Leaf
Vegetative organ - Culm Vegetative organ - Root Reproductive organ - panicle Reproductive organ - Pollination, fertilization, fertility - Male sterility Reproductive organ - Spikelet, flower, glume, awn |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK073027
|
| MSU ID |
LOC_Os06g04710.1
|
| RAP ID |
Os06g0139000 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Duan Y., Li S., Chen Z., Zheng L., Diao Z., Zhou Y., Lan T., Guan H., Pan R., Xue Y., Wu W.
Plant J. 2012 72(5) 829-42 Dwarf and Deformed Flower 1, encoding an F-box protein, is critical for vegetative and floral development in rice (Oryza sativa L.).
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Li S.P., Duan Y.L., Chen Z.W., Guan H.Z., Wang C.L., Zheng L.L., Zhou Y.C., Wu W.R.
Yi Chuan 2011 33(12) 1374-9 [Genetic analysis and gene mapping of ddf1, a pleiotropic gene involving in both vegetable and reproductive growth in rice].
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
specification of floral organ identity( GO:0010093 )
regulation of cell growth( GO:0001558 ) regulation of cell division( GO:0051302 ) nucleolus( GO:0005730 ) |
| Trait Ontology |
lodicule anatomy and morphology trait( TO:0006009 )
stamen anatomy and morphology trait( TO:0000215 ) stem length( TO:0000576 ) stem thickness( TO:0000339 ) internode length( TO:0000145 ) leaf length( TO:0000135 ) leaf thickness( TO:0000258 ) root length( TO:0000227 ) root thickness( TO:0000306 ) panicle length( TO:0000040 ) panicle size( TO:0006032 ) primary branch number( TO:0000547 ) secondary branch number( TO:0000557 ) vascular bundle number( TO:0000472 ) vascular tissue related trait( TO:0000470 ) root meristem development( TO:0002692 ) shoot apical meristem development( TO:0006020 ) lemma shape( TO:0000614 ) male sterility( TO:0000437 ) pistil anatomy and morphology trait( TO:0000223 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Oct 5, 2020 | |
