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Basic Information
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CGSNL Gene Symbol
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SOD2
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Gene Symbol Synonym
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OsSOD2, OsSOD2-Cu/Zn, SOD2-Cu/Zn, OsCSD3, CSD3, CuZnSOD3, OsCSD2, CSD2, Cu/Zn-SOD2
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CGSNL Gene Name
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SUPEROXIDE DISMUTASE 2
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Gene Name Synonym
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superoxide dismutase 2, Copper/zinc Superoxide Dismutase 2, copper-zinc superoxide dismutase 2
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Protein Name
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SUPEROXIDE DISMUTASE 2
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Allele
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Chromosome No.
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3
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Explanation
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OsCSD2 in Zheng et al. 2024. the candidate gene for qSL3 regarding seed storability. GO:0120126: response to copper ion starvation.
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Trait Class
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Biochemical character
Tolerance and resistance - Stress tolerance
Seed - Physiological traits - Longevity
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK073785
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MSU ID
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LOC_Os03g11960.1
LOC_Os03g11960.2
LOC_Os03g11960.3
LOC_Os03g11960.4
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RAP ID
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Os03g0219200
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Zheng X., Yuan Z., Yu Y., Yu S., He H.
Plants (Basel) 2024 13(2)
<i>OsCSD2</i> and <i>OsCSD3</i> Enhance Seed Storability by Modulating Antioxidant Enzymes and Abscisic Acid in Rice.
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Navarro B.B., Del Frari BK., Dias PVDC., Lemainski L.E., Mario R.B., Ponte L.R., Goergen A., Tarouco C.P., Neves V.M., Dressler V.L., Fett J.P., Brunetto G., Sperotto R.A., Nicoloso F.T., Ricachenevsky F.K.
Plant Physiol. Biochem. 2021 158 113-124
The copper economy response is partially conserved in rice (Oryza sativa L.).
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Yoo Y., Park J.C., Cho M.H., Yang J., Kim C.Y., Jung K.H., Jeon J.S., An G., Lee S.W.
Front Plant Sci 2018 9 577
Lack of a Cytoplasmic RLK, Required for ROS Homeostasis, Induces Strong Resistance to Bacterial Leaf Blight in Rice.
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Cho S.H., Lee C.H., Gi E., Yim Y., Koh H.J., Kang K., Paek N.C.
Front Plant Sci 2018 9 364
The Rice Rolled Fine Striped (RFS) CHD3/Mi-2 Chromatin Remodeling Factor Epigenetically Regulates Genes Involved in Oxidative Stress Responses During Leaf Development.
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Rossatto T., do Amaral MN., Benitez L.C., Vighi I.L., Braga E.J.B., de Magalhães Júnior AM., Maia M.A.C., da Silva Pinto L.
Physiol Mol Biol Plants 2017 23(4) 865-875
Gene expression and activity of antioxidant enzymes in rice plants, cv. BRS AG, under saline stress.
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Mahanty S., Kaul T., Pandey P., Reddy R.A., Mallikarjuna G., Reddy C.S., Sopory S.K., Reddy M.K.
Gene 2012 505(2) 309-17
Biochemical and molecular analyses of copper-zinc superoxide dismutase from a C(4) plant Pennisetum glaucum reveals an adaptive role in response to oxidative stress.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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superoxide dismutase activity( GO:0004784 )
removal of superoxide radicals( GO:0019430 )
peroxisome( GO:0005777 )
vacuole( GO:0005773 )
copper ion binding( GO:0005507 )
zinc ion binding( GO:0008270 )
response to salt stress( GO:0009651 )
abscisic acid metabolic process( GO:0009687 )
regulation of abscisic acid mediated signaling( GO:0009787 )
nucleus( GO:0005634 )
cytoplasm( GO:0005737 )
membrane( GO:0016020 )
response to oxidative stress( GO:0006979 )
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Trait Ontology
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salt tolerance( TO:0006001 )
seed longevity( TO:0000435 )
abscisic acid content( TO:0002667 )
oxidative stress( TO:0002657 )
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Plant Ontology
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plant embryo( PO:0009009 )
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Related Strains
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Phenotype images
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Last updated
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Jun 19, 2024
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Update info.