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Basic Information
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CGSNL Gene Symbol
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COG4
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Gene Symbol Synonym
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NAC59, OsNAC59, ONAC059, ONAC59, OsCOG4, ENAC1, OsENAC1
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CGSNL Gene Name
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CHILLING-TOLERANCE IN GENG/ JAPONICA RICE 4
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Gene Name Synonym
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NAC domain-containing protein 059, NAC domain-containing protein 59, Chilling-tolerance in Geng/ japonica rice 4, early NAC-domain protein induced by abiotic stress 1
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Protein Name
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NAC DOMAIN-CONTAINING PROTEIN 59
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Allele
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COG4jap, COG4ind, cog4-1, cog4-2
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Chromosome No.
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1
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Explanation
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the candidate gene for qCTS1-2 (QTL of chilling tolerance at the seedling stage 1-2). TO:0001150: chilling stress response.
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Trait Class
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Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK071274
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MSU ID
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LOC_Os01g64310.1
LOC_Os01g64310.2
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RAP ID
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Os01g0862800
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Sun S., Liu D., Luo W., Li Z., Feng J., Guo Y., Chong K., Xu Y.
Cell Rep 2024 43(11) 114965
Domestication-selected COG4-OsbZIP23 module regulates chilling tolerance in rice.
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Liu W.Z., Li Z.Y., Liu C., Yu X.T., Yu W.Q., Li P.
Genome 2023 66(6) 131-149
<i>Paenibacillus terrae</i> NK3-4 regulates the transcription of growth-related and stress resistance-related genes in rice.
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Zhu J.N., Yu Y.J., Dai M.D., Zeng Y.L., Lu X.J., Wang L., Liu X.H., Su Z.Z., Lin F.C.
Front Microbiol 2022 13 845104
A New Species in <i>Pseudophialophora</i> From Wild Rice and Beneficial Potential.
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Khan I., Jan R., Asaf S., Khan A.L., Bilal S., Kim K.M., Al-Harrasi A.
Int J Mol Sci 2022 23(23)
Genome and Transcriptome-Wide Analysis of <i>OsWRKY</i> and <i>OsNAC</i> Gene Families in <i>Oryza sativa</i> and Their Response to White-Backed Planthopper Infestation.
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Sun H., Huang X., Xu X., Lan H., Huang J., Zhang H.S.
Mol. Biotechnol. 2012 52(2) 101-10
ENAC1, a NAC Transcription Factor, is an Early and Transient Response Regulator Induced by Abiotic Stress in Rice (Oryza sativa L.).
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Shen H., Yin Y., Chen F., Xu Y., Richard A. Dixon
Bioenerg. Res. 2009 2 217–232
A Bioinformatic Analysis of NAC Genes for Plant Cell Wall Development in Relation to Lignocellulosic Bioenergy Production
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Fang Y., You J., Xie K., Xie W., Xiong L.
Mol. Genet. Genomics 2008 280(6) 547-63
Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice.
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Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K., Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K., Takahara Y., Yamamoto K., Kikuchi S.
DNA Res. 2003 10(6) 239-47
Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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DNA binding( GO:0003677 )
regulation of transcription, DNA-dependent( GO:0006355 )
response to fungus( GO:0009620 )
defense response to insect( GO:0002213 )
response to symbiotic bacterium( GO:0009609 )
response to bacterium( GO:0009617 )
response to cold( GO:0009409 )
nucleus( GO:0005634 )
response to salt stress( GO:0009651 )
response to water deprivation( GO:0009414 )
response to abscisic acid stimulus( GO:0009737 )
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Trait Ontology
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white-backed planthopper resistance( TO:0000205 )
cold tolerance( TO:0000303 )
salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 )
abscisic acid sensitivity( TO:0000615 )
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Plant Ontology
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-
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Jul 3, 2025
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Update info.