Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol NAC55
Gene Symbol Synonym ONAC055, ONAC55, CRPG64, OsCRPG64
CGSNL Gene Name NAC DOMAIN-CONTAINING PROTEIN 55
Gene Name Synonym NAC domain-containing protein 055, NAC domain-containing protein 55, collar region-preferential gene 55
Protein Name NAC DOMAIN-CONTAINING PROTEIN 55
Allele
Chromosome No. 3
Explanation one of five transcription factors downstream of LG1 (Jiang et al. 2023).
Trait Class Tolerance and resistance - Disease resistance
Other
Expression
Sequence/Locus
cDNA Accession No. AK070416
MSU ID LOC_Os03g01870.1
RAP ID Os03g0109000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Jiang X., Hong W.J., Lee S.K., Jung K.H.
Plants (Basel) 2023  12(16) 
Genome-Wide Identification and Analysis of Collar Region-Preferential Genes in Rice.
Nuruzzaman M., Sharoni A.M., Satoh K., Karim M.R., Harikrishna J.A., Shimizu T., Sasaya T., Omura T., Haque M.A., Hasan S.M., Ahmad A., Kikuchi S.
Front Plant Sci 2015  6  676
NAC transcription factor family genes are differentially expressed in rice during infections with Rice dwarf virus, Rice black-streaked dwarf virus, Rice grassy stunt virus, Rice ragged stunt virus, and Rice transitory yellowing virus.
Shen H., Yin Y., Chen F., Xu Y., Richard A. Dixon
Bioenerg. Res. 2009  2  217–232
A Bioinformatic Analysis of NAC Genes for Plant Cell Wall Development in Relation to Lignocellulosic Bioenergy Production
Fang Y., You J., Xie K., Xie W., Xiong L.
Mol. Genet. Genomics 2008  280(6)  547-63
Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice.
Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K., Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K., Takahara Y., Yamamoto K., Kikuchi S.
DNA Res. 2003  10(6)  239-47
Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana.
DB Reference
Gramene ID -
Ontologies
Gene Ontology DNA binding( GO:0003677 )
regulation of transcription, DNA-dependent( GO:0006355 )
defense response to virus( GO:0051607 )
Trait Ontology viral disease resistance( TO:0000148 )
black streak dwarf virus resistance( TO:0000020 )
rice grassy stunt 1 and 2 virus resistance( TO:0000213 )
rice ragged stunt virus resistance( TO:0000386 )
Plant Ontology leaf collar( PO:0006012 )
Related Strains
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Phenotype images
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Last updated
Nov 29, 2023

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