Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol NAC40
Gene Symbol Synonym ONAC040, ONAC40, ONAC054, ONAC54, OsNTL5, NTL5
CGSNL Gene Name NAC DOMAIN-CONTAINING PROTEIN 40
Gene Name Synonym NAC domain-containing protein 040, NAC domain-containing protein 40, NAC domain-containing protein 54, NAC membrane-bound transcription factor 5, NAC MTF5, membrane-bound NAC-like TF 5
Protein Name NAC DOMAIN-CONTAINING PROTEIN 40
Allele
Chromosome No. 8
Explanation LOC_Os08g44820. PO:0030123: panicle inflorescence.
Trait Class Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK069733
AK099629
MSU ID LOC_Os08g44820.1
LOC_Os08g44820.2
LOC_Os08g44820.3
LOC_Os08g44820.4
LOC_Os08g44820.5
RAP ID Os08g0562200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
-
Map
Locate(cM)
Link map Classical linkage map
References
Guo S., Dai S., Singh P.K., Wang H., Wang Y., Tan J.L.H., Wee W., Ito T.
Front Plant Sci 2018  9  555
A Membrane-Bound NAC-Like Transcription Factor OsNTL5 Represses the Flowering in <i>Oryza sativa</i>.
Sang-Gyu Kim, Lee S., Pil Joon Seo, Soon-Kap Kim, Jeong-Kook Kim, Chung-Mo Park
Genomics 2010  95(1)  56-65
Genome-scale screening and molecular characterization of membrane-bound transcription factors in Arabidopsis and rice.
Shen H., Yin Y., Chen F., Xu Y., Richard A. Dixon
Bioenerg. Res. 2009  2  217–232
A Bioinformatic Analysis of NAC Genes for Plant Cell Wall Development in Relation to Lignocellulosic Bioenergy Production
Fang Y., You J., Xie K., Xie W., Xiong L.
Mol. Genet. Genomics 2008  280(6)  547-63
Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice.
Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K., Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K., Takahara Y., Yamamoto K., Kikuchi S.
DNA Res. 2003  10(6)  239-47
Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana.
TextPresso Search Search textpresso for NAC40 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology DNA binding( GO:0003677 )
regulation of transcription, DNA-dependent( GO:0006355 )
leaf development( GO:0048366 )
response to salt stress( GO:0009651 )
response to water deprivation( GO:0009414 )
regulation of photoperiodism, flowering( GO:2000028 )
nucleus( GO:0005634 )
Trait Ontology leaf development trait( TO:0000655 )
salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 )
Plant Ontology leaf development stage( PO:0001050 )
leaf( PO:0025034 )
Related Strains
-
Phenotype images
-
Last updated
Dec 22, 2018


/rice/oryzabase