Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym ONAC003, ONAC3, ONAC016, ONAC16, SNAC3, OsSND3, SND3, OsNAC006, NAC006
CGSNL Gene Name _
Gene Name Synonym NAC domain-containing protein 003, NAC domain-containing protein 3, NAC domain-containing protein 16, stress-responsive NAC transcription factor 3, SECONDARY WALL-ASSOCIATED NAC PROTEIN3
Protein Name _
Allele osnac006, osnac006_1, osnac006_2
Chromosome No. 1
Explanation GO:2000377: regulation of reactive oxygen species metabolic process. NCBI SRA database accession number: PRJNA603607.
Trait Class Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK061716
AK106152
AK066231
AK121339
MSU ID LOC_Os01g09550.1
LOC_Os01g09550.2
LOC_Os01g09550.3
LOC_Os01g09550.4
RAP ID Os01g0191300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Wang B., Zhong Z., Wang X., Han X., Yu D., Wang C., Song W., Zheng X., Chen C., Zhang Y.
Int J Mol Sci 2020  21(7) 
Knockout of the <i>OsNAC006</i> Transcription Factor Causes Drought and Heat Sensitivity in Rice.
Zhao K., Lin F., Romero-Gamboa SP., Saha P., Goh H.J., An G., Jung K.H., Hazen S.P., Bartley L.E.
Front Plant Sci 2019  10  1275
Rice Genome-Scale Network Integration Reveals Transcriptional Regulators of Grass Cell Wall Synthesis.
Fang Y., Liao K., Du H., Xu Y., Song H., Li X., Xiong L.
J. Exp. Bot. 2015   
A stress-responsive NAC transcription factor SNAC3 confers heat and drought tolerance through modulation of reactive oxygen species in rice.
Shen H., Yin Y., Chen F., Xu Y., Richard A. Dixon
Bioenerg. Res. 2009  2  217–232
A Bioinformatic Analysis of NAC Genes for Plant Cell Wall Development in Relation to Lignocellulosic Bioenergy Production
Fang Y., You J., Xie K., Xie W., Xiong L.
Mol. Genet. Genomics 2008  280(6)  547-63
Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice.
Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K., Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K., Takahara Y., Yamamoto K., Kikuchi S.
DNA Res. 2003  10(6)  239-47
Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana.
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DB Reference
Gramene ID -
Ontologies
Gene Ontology response to gibberellin stimulus( GO:0009739 )
response to auxin stimulus( GO:0009733 )
response to osmotic stress( GO:0006970 )
response to cold( GO:0009409 )
response to hydrogen peroxide( GO:0042542 )
DNA binding( GO:0003677 )
regulation of transcription, DNA-dependent( GO:0006355 )
response to water deprivation( GO:0009414 )
response to heat( GO:0009408 )
response to salt stress( GO:0009651 )
response to abscisic acid stimulus( GO:0009737 )
response to oxidative stress( GO:0006979 )
Trait Ontology drought tolerance( TO:0000276 )
heat tolerance( TO:0000259 )
salt tolerance( TO:0006001 )
abscisic acid sensitivity( TO:0000615 )
oxidative stress( TO:0002657 )
hydrogen peroxide content( TO:0000605 )
cold tolerance( TO:0000303 )
osmotic response sensitivity( TO:0000095 )
auxin sensitivity( TO:0000163 )
gibberellic acid sensitivity( TO:0000166 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jul 22, 2020


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