Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym OsSAMS3, OsSAMS1, SAMS3, SAMS1, SAM2, SAM1
CGSNL Gene Name _
Gene Name Synonym S-Adenosyl-l-methionine synthetase 3
Protein Name
Allele
Chromosome No. 1
Explanation Q9LGU6. CI069897. OsSAMS1 in Ishimaru et al. 2010. SAM2 in Yoon et al. 2020. SAM1 in Shim et al. 2021. SAMS3 in Lin et al. 2021.
Trait Class Biochemical character
Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK241882
MSU ID LOC_Os01g18860.1
LOC_Os01g18860.2
RAP ID Os01g0293000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Shim J.S., Park S.H., Lee D.K., Kim Y.S., Park S.C., Redillas MCFR., Seo J.S., Kim J.K.
Rice (N Y) 2021  14(1)  31
The rice GLYCINE-RICH PROTEIN 3 Confers drought tolerance by Regulating mRNA Stability of ROS Scavenging-Related Genes.
Lin W., Wang Y., Liu X., Shang J.X., Zhao L.
Front Plant Sci 2021  12  751965
OsWAK112, A Wall-Associated Kinase, Negatively Regulates Salt Stress Responses by Inhibiting Ethylene Production.
Yoon J., Cho L.H., Yang W., Pasriga R., Wu Y., Hong W.J., Bureau C., Wi S.J., Zhang T., Wang R., Zhang D., Jung K.H., Park K.Y., Périn C., Zhao Y., An G.
J. Exp. Bot. 2020   
Homeobox transcription factor OsZHD2 promotes root meristem activity in rice by inducing ethylene biosynthesis.
Song Y.a, Cui J.a, Zhang H.b, Wang G.a, Zhao F.J.c, Shen Z.a
Plant Soil 2013  366  647-658
Proteomic analysis of copper stress responses in the roots of two rice (Oryza sativa L.) varieties differing in Cu tolerance
Li W., Han Y., Tao F., Chong K.
J. Plant Physiol. 2011  168(15)  1837-43
Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice.
Ishimaru Y., Masuda H., Bashir K., Inoue H., Tsukamoto T., Takahashi M., Nakanishi H., Aoki N., Hirose T., Ohsugi R., Naoko K Nishizawa
Plant J. 2010  62(3)  379-90
Rice metal-nicotianamine transporter, OsYSL2, is required for the long-distance transport of iron and manganese.
DB Reference
Gramene ID -
Ontologies
Gene Ontology methionine adenosyltransferase activity( GO:0004478 )
ATP binding( GO:0005524 )
cell wall( GO:0005618 )
nucleolus( GO:0005730 )
cytoplasm( GO:0005737 )
plasma membrane( GO:0005886 )
methionine metabolic process( GO:0006555 )
S-adenosylmethionine biosynthetic process( GO:0006556 )
one-carbon metabolic process( GO:0006730 )
response to cold( GO:0009409 )
lignin biosynthetic process( GO:0009809 )
methanogenesis( GO:0015948 )
metal ion binding( GO:0046872 )
response to copper ion( GO:0046688 )
Trait Ontology copper sensitivity( TO:0000021 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
May 17, 2022

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