Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol SWI3C
Gene Symbol Synonym OsSWI3C, OsCHB705, CHB705, OsSWI3C1, SWI3C1, HDMA706, OsHDMA706
CGSNL Gene Name _
Gene Name Synonym SWIRM domain-containing protein OsSWI3C, SWITCH/SUCROSE NONFERMENTING (SWI/SNF) chromatin remodelling complex subunit 3C
Protein Name
Allele
Chromosome No. 11
Explanation a putative rice SWI/SNF CRC component.
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK066941
MSU ID LOC_Os11g08080.1
LOC_Os11g08080.2
RAP ID Os11g0183700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Huang Y., Liu J., Cheng L., Xu D., Liu S., Hu H., Ling Y., Yang R., Zhang Y.
Plants (Basel) 2024  13(17) 
Genome-Wide Analysis of the Histone Modification Gene (<i>HM</i>) Family and Expression Investigation during Anther Development in Rice (<i>Oryza sativa</i> L.).
Yang J., Chang Y., Qin Y., Chen D., Zhu T., Peng K., Wang H., Tang N., Li X., Wang Y., Liu Y., Li X., Xie W., Xiong L.
New Phytol. 2020  227(1)  65-83
A lamin-like protein OsNMCP1 regulates drought resistance and root growth through chromatin accessibility modulation by interacting with a chromatin remodeller OsSWI3C in rice.
Qi D., Wen Q., Meng Z., Yuan S., Guo H., Zhao H., Cui S.
Plant J. 2020  104(4)  901-916
OsLFR is essential for early endosperm and embryo development by interacting with SWI/SNF complex members in Oryza sativa.
Sun L.J., Zhang Q., Tie-Gang L.U., Sun Y.
Progress in Biochemistry and Biophysics 2012  39  438-447
Screen of receptor-like kinase OsWAK50 intracellular interacting proteins by yeast two-hybrid system
Gao Y., Yang S., Yuan L., Cui Y., Wu K.
Comp. Funct. Genomics 2012  2012  -
Comparative analysis of SWIRM domain-containing proteins in plants
DB Reference
Gramene ID -
Ontologies
Gene Ontology DNA binding( GO:0003677 )
chromatin binding( GO:0003682 )
nucleus( GO:0005634 )
zinc ion binding( GO:0008270 )
response to water deprivation( GO:0009414 )
response to flooding( GO:0009413 )
response to heat( GO:0009408 )
response to cold( GO:0009409 )
response to salt stress( GO:0009651 )
Trait Ontology drought tolerance( TO:0000276 )
flooding related trait( TO:0000114 )
heat tolerance( TO:0000259 )
cold tolerance( TO:0000303 )
salt tolerance( TO:0006001 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 14, 2025

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