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Basic Information
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CGSNL Gene Symbol
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GPA6
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Gene Symbol Synonym
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OsNHX5, NHX5, OsGPA6, OsNHX4, NHX4
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CGSNL Gene Name
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GLUTELIN PRECURSOR ACCUMULATION 6
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Gene Name Synonym
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Na+/H+ antiporter 5, NHX-type antiporter 5, glutelin precursor accumulation6, Sodium/hydrogen antiporter 5, Na+/H+ exchanger 4
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Protein Name
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NA+/H+ ANTIPORTER 5
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Allele
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gpa6
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Chromosome No.
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9
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Explanation
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AB531434. AU174198. Oryza sativa subsp. Indica: BGIOSGA030066, Oryza rufipogon: ORUFI09G04390, Oryza meridionalis: OMERI09G03010, Oryza nivara: ONIVA09G04150, Oryza barthii: OBART09G03930, Oryza glumipatula: OGLUM09G04670. OsNHX4 in Islam et al. 2025.
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Trait Class
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Biochemical character
Seed - Physiological traits - Storage substances
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK072114
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MSU ID
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LOC_Os09g11450.1
LOC_Os09g11450.2
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RAP ID
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Os09g0286400
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Islam M.S.U., Akter N., Zohra F.T., Rashid S.B., Hasan N., Rahman S.M., Sarkar M.A.R.
PLoS ONE 2025 20(1) e0317008
Genome-wide identification and characterization of cation-proton antiporter (CPA) gene family in rice (Oryza sativa L.) and their expression profiles in response to phytohormones.
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Feng Z., Xu Y., Xie Z., Yang Y., Lu G., Jin Y., Wang M., Liu M., Yang H., Li W., Liang Z.
Plants (Basel) 2024 13(12)
Overexpression of Abscisic Acid Biosynthesis Gene <i>OsNCED3</i> Enhances Survival Rate and Tolerance to Alkaline Stress in Rice Seedlings.
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Solis C.A., Yong M.T., Zhou M., Venkataraman G., Shabala L., Holford P., Shabala S., Chen Z.H.
Int J Mol Sci 2022 23(4)
Evolutionary Significance of NHX Family and NHX1 in Salinity Stress Adaptation in the Genus <i>Oryza</i>.
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Farooq M., Park J.R., Jang Y.H., Kim E.G., Kim K.M.
Front Plant Sci 2021 12 680131
Rice Cultivars Under Salt Stress Show Differential Expression of Genes Related to the Regulation of Na+/K+ Balance.
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Neang S., Goto I., Skoulding N.S., Cartagena J.A., Kano-Nakata M., Yamauchi A., Mitsuya S.
BMC Plant Biol. 2020 20(1) 502
Tissue-specific expression analysis of Na+ and Cl- transporter genes associated with salt removal ability in rice leaf sheath.
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Zhu J., Ren Y., Wang Y., Liu F., Teng X., Zhang Y., Duan E., Wu M., Zhong M., Hao Y., Zhu X., Lei J., Wang Y., Yu Y., Pan T., Bao Y., Wang Y., Wan J.
BMC Plant Biol. 2019 19(1) 295
OsNHX5-mediated pH homeostasis is required for post-Golgi trafficking of seed storage proteins in rice endosperm cells.
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Vu H.T.T., Manangkil O.E., Mori N., Yoshida S., Nakamura C.
Biotechnology and Biotechnological Equipment 2012 26 2945-2951
Induction and repression of gene expression mediating ethylene biosynthesis and sodium/proton exchange in rice seedlings under submergence stress
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Fukuda,A., Nakamura,A., Hara,N., Toki,S. and Tanaka,Y.
Planta 2011 233(1) 175-188
Molecular and functional analyses of rice NHX-type Na+/H+ antiporter genes
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Ahmadi N., Negrão S., Katsantonis D., Frouin J., Ploux J., Letourmy P., Droc G., Babo P., Trindade H., Bruschi G., Greco R., Oliveira M.M., Piffanelli P., Courtois B.
Theor. Appl. Genet. 2011 123(6) 881-95
Targeted association analysis identified japonica rice varieties achieving Na(+)/K (+) homeostasis without the allelic make-up of the salt tolerant indica variety Nona Bokra.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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post-Golgi vesicle-mediated transport( GO:0006892 )
protein transport( GO:0015031 )
Golgi apparatus( GO:0005794 )
trans-Golgi network( GO:0005802 )
regulation of pH( GO:0006885 )
integral to membrane( GO:0016021 )
sodium:hydrogen antiporter activity( GO:0015385 )
response to salt stress( GO:0009651 )
response to abscisic acid stimulus( GO:0009737 )
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Trait Ontology
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protein content( TO:0000598 )
floury endosperm( TO:0000104 )
starch grain shape( TO:0002656 )
1000-dehulled grain weight( TO:0000592 )
salt tolerance( TO:0006001 )
amylose content( TO:0000196 )
fat and essential oil content( TO:0000604 )
abscisic acid sensitivity( TO:0000615 )
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Plant Ontology
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leaf sheath( PO:0020104 )
root( PO:0009005 )
shoot system( PO:0009006 )
anther( PO:0009066 )
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Related Strains
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Phenotype images
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Last updated
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Jun 13, 2025
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Update info.