Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol GPA6
Gene Symbol Synonym OsNHX5, NHX5, OsGPA6
CGSNL Gene Name GLUTELIN PRECURSOR ACCUMULATION 6
Gene Name Synonym Na+/H+ antiporter 5, NHX-type antiporter 5, glutelin precursor accumulation6
Protein Name NA+/H+ ANTIPORTER 5
Allele gpa6
Chromosome No. 9
Explanation AB531434. AU174198.
Trait Class Biochemical character
Seed - Physiological traits - Storage substances
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK072114
MSU ID LOC_Os09g11450.1
LOC_Os09g11450.2
RAP ID Os09g0286400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Zhu J., Ren Y., Wang Y., Liu F., Teng X., Zhang Y., Duan E., Wu M., Zhong M., Hao Y., Zhu X., Lei J., Wang Y., Yu Y., Pan T., Bao Y., Wang Y., Wan J.
BMC Plant Biol. 2019  19(1)  295
OsNHX5-mediated pH homeostasis is required for post-Golgi trafficking of seed storage proteins in rice endosperm cells.
Vu H.T.T., Manangkil O.E., Mori N., Yoshida S., Nakamura C.
Biotechnology and Biotechnological Equipment 2012  26  2945-2951
Induction and repression of gene expression mediating ethylene biosynthesis and sodium/proton exchange in rice seedlings under submergence stress
Fukuda,A., Nakamura,A., Hara,N., Toki,S. and Tanaka,Y.
Planta 2011  233(1)  175-188
Molecular and functional analyses of rice NHX-type Na+/H+ antiporter genes
Ahmadi N., Negrão S., Katsantonis D., Frouin J., Ploux J., Letourmy P., Droc G., Babo P., Trindade H., Bruschi G., Greco R., Oliveira M.M., Piffanelli P., Courtois B.
Theor. Appl. Genet. 2011  123(6)  881-95
Targeted association analysis identified japonica rice varieties achieving Na(+)/K (+) homeostasis without the allelic make-up of the salt tolerant indica variety Nona Bokra.
TextPresso Search Search textpresso for GPA6 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology integral to membrane( GO:0016021 )
regulation of pH( GO:0006885 )
sodium:hydrogen antiporter activity( GO:0015385 )
post-Golgi vesicle-mediated transport( GO:0006892 )
protein transport( GO:0015031 )
Golgi apparatus( GO:0005794 )
trans-Golgi network( GO:0005802 )
Trait Ontology protein content( TO:0000598 )
floury endosperm( TO:0000104 )
starch grain shape( TO:0002656 )
1000-dehulled grain weight( TO:0000592 )
amylose content( TO:0000196 )
fat and essential oil content( TO:0000604 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Mar 4, 2020


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