Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol SPL18
Gene Symbol Synonym OsSPL18
CGSNL Gene Name RICE SQUAMOSA PROMOTER-BINDING-LIKE 18
Gene Name Synonym Squamosa promoter-binding-like protein 18
Protein Name RICE SQUAMOSA PROMOTER-BINDING-LIKE POTEIN 18
Allele
Chromosome No. 9
Explanation Q0J0K1. TO:0000975: grain width. PO:0030123: panicle inflorescence. the Candidate Gene of qPL9-6.
Trait Class Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Other
Expression
Sequence/Locus
cDNA Accession No. Q0J0K1
MSU ID LOC_Os09g32944.1
RAP ID Os09g0507100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Bai S., Hong J., Li L., Su S., Li Z., Wang W., Zhang F., Liang W., Zhang D.
Rice (N Y) 2021  14(1)  77
Dissection of the Genetic Basis of Rice Panicle Architecture Using a Genome-wide Association Study.
Yuan H., Qin P., Hu L., Zhan S., Wang S., Gao P., Li J., Jin M., Xu Z., Gao Q., Du A., Tu B., Chen W., Ma B., Wang Y., Li S.
J Genet Genomics 2019  46(1)  41-51
OsSPL18 controls grain weight and grain number in rice.
Xie K, Wu C, Xiong L.
Plant Physiol. 2006  142(1)  280-293
Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology regulation of transcription, DNA-dependent( GO:0006355 )
transcription, DNA-dependent( GO:0006351 )
nucleus( GO:0005634 )
DNA binding( GO:0003677 )
metal ion binding( GO:0046872 )
seed development( GO:0048316 )
inflorescence development( GO:0010229 )
regulation of cell proliferation( GO:0042127 )
positive regulation of transcription, DNA-dependent( GO:0045893 )
Trait Ontology grain weight( TO:0000590 )
grain number( TO:0002759 )
seed width( TO:0000149 )
grain thickness( TO:0000399 )
panicle length( TO:0000040 )
inflorescence development trait( TO:0000621 )
seed development trait( TO:0000653 )
Plant Ontology inflorescence development stage( PO:0001083 )
seed development stage( PO:0001170 )
Related Strains
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Phenotype images
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Last updated
Mar 15, 2022

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