Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol BURP16
Gene Symbol Synonym OsRD22, RD22, OsBURP16
CGSNL Gene Name BURP DOMAIN-CONTAINING PROTEIN 16
Gene Name Synonym polygalacturonase isoenzyme 1 beta subunit, BURP domain-containing protein 16, beta subunit of polygalacturonase 1, polygalacturonase 1 beta subunit, non-catalytic PG1beta subunit
Protein Name BURP DOMAIN-CONTAINING PROTEIN 16
Allele
Chromosome No. 10
Explanation Q7XES5. AF251069.
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK120091
MSU ID LOC_Os10g26940.1
RAP ID Os10g0409400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Jung H., Park H.J., Jo S.H., Lee A., Lee H.J., Kim H.S., Jung C., Cho H.S.
New Phytol. 2023  238(6)  2476-2494
Nuclear OsFKBP20-1b maintains SR34 stability and promotes the splicing of retained introns upon ABA exposure in rice.
Xu Y., Hu D., Hou X., Shen J., Liu J., Cen X., Fu J., Li X., Hu H., Xiong L.
New Phytol. 2020  227(2)  498-512
OsTMF attenuates cold tolerance by affecting cell wall properties in rice.
de Freitas GM., Thomas J., Liyanage R., Lay J.O., Basu S., Ramegowda V., do Amaral MN., Benitez L.C., Bolacel Braga EJ., Pereira A.
PLoS ONE 2019  14(6)  e0218019
cold tolerance response mechanisms revealed through comparative analysis of gene and protein expression in multiple rice genotypes.
Yuenyong W., Chinpongpanich A., Comai L., Chadchawan S., Buaboocha T.
BMC Plant Biol. 2018  18(1)  335
Downstream components of the calmodulin signaling pathway in the rice salt stress response revealed by transcriptome profiling and target identification.
Hayashi G., Shibato J., Imanaka T., Cho K., Kubo A., Kikuchi S., Satoh K., Kimura S., Ozawa S., Fukutani S., Endo S., Ichikawa K., Agrawal G.K., Shioda S., Fukumoto M., Rakwal R.
J. Hered. 2014  105(5)  723-38
Unraveling low-level gamma radiation--responsive changes in expression of early and late genes in leaves of rice seedlings at litate Village, Fukushima.
Liu H., Ma Y., Chen N., Guo S., Liu H., Guo X., Chong K., Xu Y.
Plant Cell Environ. 2013   
Overexpression of stress-inducible OsBURP16, the beta-subunit of polygalacturonase 1, decreases pectin contents and cell adhesion, and increases abiotic stress sensitivity in rice.
Jan A., Maruyama K., Todaka D., Kidokoro S., Abo M., Yoshimura E., Shinozaki K., Nakashima K., Kazuko Yamaguchi-Shinozaki
Plant Physiol. 2013  161(3)  1202-16
OsTZF1, a CCCH-tandem zinc finger protein, confers delayed senescence and stress tolerance in rice by regulating stress-related genes.
Ding X,Hou X,Xie K,Xiong L
Planta. 2009  230  149-63
Genome-wide identification of BURP domain-containing genes in rice reveals a gene family with diverse structures and responses to abiotic stresses.
Lee,R.H., Wang,C.H., Huang,L.T. and Chen,S.C.
J. Exp. Bot. 2001  52(358)  1117-1121
Leaf senescence in rice plants: cloning and characterization of senescence up-regulated genes.
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to gamma radiation( GO:0010332 )
response to cold( GO:0009409 )
response to salt stress( GO:0009651 )
Trait Ontology cold tolerance( TO:0000303 )
salt tolerance( TO:0006001 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 12, 2023

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