|
Basic Information
|
|
CGSNL Gene Symbol
|
ICL
|
|
Gene Symbol Synonym
|
OsEnS-107, EnS-107, OsI85, I85, OsICL, Osl85, l43, Osl43, OsL85
|
|
CGSNL Gene Name
|
ISOCITRATE LYASE
|
|
Gene Name Synonym
|
isocitrate lyase, endosperm-specific gene 107
|
|
Protein Name
|
ISOCITRATE LYASE
|
|
Allele
|
icl
|
|
Chromosome No.
|
7
|
|
Explanation
|
AF251075. Osl85 in Wu and Yang 2016, Xing et al. 2018, Gong et al. 2019, Zhao et al. 2021, Chen et al. 2021. l43 in Fang et al. 2016.
|
|
Trait Class
|
Tolerance and resistance - Stress tolerance
Vegetative organ - Leaf
Biochemical character
Tolerance and resistance - Disease resistance
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK063353
|
|
MSU ID
|
LOC_Os07g34520.1
LOC_Os07g34520.2
LOC_Os07g34520.3
|
|
RAP ID
|
Os07g0529000
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Zhang C., Li N., Hu Z., Liu H., Hu Y., Tan Y., Sun Q., Liu X., Xiao L., Wang W., Wang R.
Int J Mol Sci 2022 23(22)
Mutation of <i>leaf senescence 1</i> Encoding a C2H2 Zinc Finger Protein Induces ROS Accumulation and Accelerates leaf senescence in Rice.
|
|
Mahesh H.B., Shirke M.D., Wang G.L., Gowda M.
Genomics 2021 113(1 Pt 1) 265-275
In planta transcriptome analysis reveals tissue-specific expression of pathogenicity genes and microRNAs during rice-Magnaporthe interactions.
|
|
Chen D., Qiu Z., He L., Hou L., Li M., Zhang G., Wang X., Chen G., Hu J., Gao Z., Dong G., Ren D., Shen L., Zhang Q., Guo L., Qian Q., Zeng D., Zhu L.
J. Exp. Bot. 2021 72(5) 1589-1605
The rice LRR-like1 protein YELLOW AND PREMATURE DWARF 1 is involved in leaf senescence induced by high light.
|
|
Zhao X., Zhang T., Feng H., Qiu T., Li Z., Yang J., Peng Y.L., Zhao W.
Rice (N Y) 2021 14(1) 10
OsNBL1, a Multi-Organelle Localized Protein, Plays Essential Roles in Rice Senescence, disease resistance, and salt tolerance.
|
|
Wang Z., Wang Q., Wei L., Shi Y., Li T., Hu K., Liu S., Zhong H., Liao J., Li Y., Zhang H., Huang Y.
Front Plant Sci 2021 12 685102
UDP-<i>N</i>-Acetylglucosamine Pyrophosphorylase 2 (UAP2) and 1 (UAP1) Perform Synergetic Functions for Leaf Survival in Rice.
|
|
Lian L., Lin Y., Wei Y., He W., Cai Q., Huang W., Zheng Y., Xu H., Wang F., Zhu Y., Luo X., Xie H., Zhang J.
BMC Plant Biol. 2021 21(1) 287
PEPC of sugarcane regulated glutathione S-transferase and altered carbon-nitrogen metabolism under different N source concentrations in Oryza sativa.
|
|
Mohammad Hasanuzzaman Rani, Liu Q., Yu N., Zhang Y., Wang B., Cao Y., Zhang Y., Md Anowerul Islam, Workie Anley Zegeye, Cao L., Cheng S.
Plant Mol. Biol. 2020 102(4-5) 501-515
es5 is involved in the regulation of phosphatidylserine synthesis and impacts on early senescence in rice (Oryza sativa L.).
|
|
Kim T., Kang K., Kim S.H., An G., Paek N.C.
Int J Mol Sci 2019 20(18)
OsWRKY5 Promotes Rice leaf senescence via Senescence-Associated NAC and Abscisic Acid Biosynthesis Pathway.
|
|
Yuenyong W., Sirikantaramas S., Qu L.J., Buaboocha T.
BMC Plant Biol. 2019 19(1) 472
Isocitrate lyase plays important roles in plant salt tolerance.
|
|
Gong P., Luo Y., Huang F., Chen Y., Zhao C., Wu X., Li K., Yang X., Cheng F., Xiang X., Wu C., Pan G.
Plant Mol. Biol. 2019 100(1-2) 133-149
Disruption of a Upf1-like helicase-encoding gene OsPLS2 triggers light-dependent premature leaf senescence in rice.
|
|
Sim J.S., Kesawat M.S., Kumar M., Kim S.Y., Mani V., Subramanian P., Park S., Lee C.M., Kim S.R., Hahn B.S.
Int J Mol Sci 2018 19(4)
Lack of the alpha1,3-Fucosyltransferase Gene (<i>OsFucT</i>) Affects Anther Development and pollen Viability in Rice.
|
|
Wang M., Zhang T., Peng H., Luo S., Tan J., Jiang K., Heng Y., Zhang X., Guo X., Zheng J., Cheng Z.
Front Plant Sci 2018 9 560
Rice <i>Premature leaf senescence 2</i>, Encoding a Glycosyltransferase (GT), Is Involved in leaf senescence.
|
|
Xu X., Chen Z., Shi Y.F., Wang H.M., He Y., Shi L., Chen T., Wu J.L., Zhang X.B.
BMC Plant Biol. 2018 18(1) 264
Functional inactivation of OsGCNT induces enhanced disease resistance to Xanthomonas oryzae pv. oryzae in rice.
|
|
Yuenyong W., Chinpongpanich A., Comai L., Chadchawan S., Buaboocha T.
BMC Plant Biol. 2018 18(1) 335
Downstream components of the calmodulin signaling pathway in the rice salt stress response revealed by transcriptome profiling and target identification.
|
|
Xing Y., Guo S., Chen X., Du D., Liu M., Xiao Y., Zhang T., Zhu M., Zhang Y., Sang X., He G., Wang N.
Plant Cell Physiol. 2018 59(12) 2512-2525
Nitrogen Metabolism is Affected in the Nitrogen-Deficient Rice Mutant ESL4 with a Calcium-Dependent Protein Kinase Gene Mutation.
|
|
Mao C., Lu S., Lv B., Zhang B., Shen J., He J., Luo L., Xi D., Chen X., Ming F.
Plant Physiol. 2017 174(3) 1747-1763
A Rice NAC Transcription Factor Promotes leaf senescence via ABA Biosynthesis.
|
|
Li Z., Ding B., Zhou X., Wang G.L.
PLoS Pathog. 2017 13(1) e1006157
The Rice Dynamin-Related Protein OsDRP1E Negatively Regulates Programmed Cell Death by Controlling the Release of cytochrome c from mitochondria.
|
|
Sun L., Wang Y., Liu L.L., Wang C., Gan T., Zhang Z., Wang Y., Wang D., Niu M., Long W., Li X., Zheng M., Jiang L., Wan J.
Sci Rep 2017 7 41846
Isolation and characterization of a spotted leaf 32 mutant with early leaf senescence and enhanced defense response in rice.
|
|
Liu J., Shen J., Xu Y., Li X., Xiao J., Xiong L.
J. Exp. Bot. 2016 67(19) 5785-5798
Ghd2, a CONSTANS-like gene, confers drought sensitivity through regulation of senescence in rice.
|
|
Fang C., Zhang H., Wan J., Wu Y., Li K., Jin C., Chen W., Wang S., Wang W., Zhang H., Zhang P., Zhang F., Qu L., Liu X., Zhou D.X., Luo J.
Mol Plant 2016
Control of leaf senescence by a MeOH-Jasmonates Cascade That Is Epigenetically Regulated by OsSRT1 in Rice.
|
|
Wu Y.S., Yang C.Y.
Rice (N Y) 2016 9(1) 2
Physiological Responses and Expression Profile of NADPH Oxidase in Rice (Oryza Sativa) Seedlings under Different Levels of Submergence.
|
|
Liang C., Wang Y., Zhu Y., Tang J., Hu B., Liu L., Ou S., Wu H., Sun X., Chu J., Chu C.
Proc. Natl. Acad. Sci. U.S.A. 2014 111(27) 10013-8
OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic acid biosynthesis and directly targeting senescence-associated genes in rice.
|
|
Ramegowda V., Basu S., Krishnan A., Pereira A.
Plant Physiol. 2014 166(3) 1634-45
Rice GROWTH UNDER DROUGHT KINASE Is Required for Drought Tolerance and grain yield under Normal and Drought Stress Conditions.
|
|
Ma B., He S.J., Duan K.X., Yin C.C., Chen H., Yang C., Xiong Q., Song Q.X., Lu X., Chen H.W., Zhang W.K., Lu T.G., Chen S.Y., Zhang J.S.
Mol Plant 2013 6(6) 1830-48
Identification of rice ethylene-response mutants and characterization of MHZ7/OsEIN2 in distinct ethylene response and yield trait regulation.
|
|
Nie D.M., Ouyang Y.D., Wang X., Zhou W., Hu C.G., Yao J.
Gene 2013 530(2) 236-47
Genome-wide analysis of endosperm-specific genes in rice.
|
|
Jan A., Maruyama K., Todaka D., Kidokoro S., Abo M., Yoshimura E., Shinozaki K., Nakashima K., Kazuko Yamaguchi-Shinozaki
Plant Physiol. 2013 161(3) 1202-16
OsTZF1, a CCCH-tandem zinc finger protein, confers delayed senescence and stress tolerance in rice by regulating stress-related genes.
|
|
Lee,R.H., Wang,C.H., Huang,L.T. and Chen,S.C.
J. Exp. Bot. 2001 52(358) 1117-1121
Leaf senescence in rice plants: cloning and characterization of senescence up-regulated genes.
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
defense response to fungus( GO:0050832 )
isocitrate lyase activity( GO:0004451 )
carboxylic acid metabolic process( GO:0019752 )
leaf senescence( GO:0010150 )
response to water deprivation( GO:0009414 )
response to flooding( GO:0009413 )
response to salt stress( GO:0009651 )
|
|
Trait Ontology
|
leaf senescence( TO:0000249 )
drought tolerance( TO:0000276 )
submergence tolerance( TO:0000524 )
salt tolerance( TO:0006001 )
leaf blast disease resistance( TO:0000468 )
|
|
Plant Ontology
|
4 leaf senescence stage( PO:0001054 )
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Jun 29, 2023
|
Update info.