|
Basic Information
|
|
CGSNL Gene Symbol
|
BHLH63
|
|
Gene Symbol Synonym
|
OsIRO3, IRO3, OsbHLH063, bHLH063, bHLH63
|
|
CGSNL Gene Name
|
BASIC HELIX-LOOP-HELIX PROTEIN 63
|
|
Gene Name Synonym
|
basic helix-loop-helix protein 063, iron-related transcription factor 3
|
|
Protein Name
|
BASIC HELIX-LOOP-HELIX PROTEIN 63
|
|
Allele
|
|
|
Chromosome No.
|
3
|
|
Explanation
|
GO:1901967: negative regulation of cellular response to iron ion starvation. Transcriptional regulator (putatively negative).
|
|
Trait Class
|
Tolerance and resistance - Stress tolerance
Other
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK068704
|
|
MSU ID
|
LOC_Os03g26210.1
LOC_Os03g26210.2
LOC_Os03g26210.3
|
|
RAP ID
|
Os03g0379300
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Liang G., Zhang H., Li Y., Pu M., Yang Y., Li C., Lu C., Xu P., Yu D.
J Integr Plant Biol 2020 62(5) 668-689
Oryza sativa FER-LIKE FE DEFICIENCY-INDUCED TRANSCRIPTION FACTOR (OsFIT/OsbHLH156) interacts with OsIRO2 to regulate iron homeostasis.
|
|
Wang S., Li L., Ying Y., Wang J., Shao J.F., Yamaji N., Whelan J., Ma J.F., Shou H.
New Phytol. 2020 225(3) 1247-1260
A transcription factor OsbHLH156 regulates Strategy II iron acquisition through localising IRO2 to the nucleus in rice.
|
|
Zhang H., Li Y., Pu M., Xu P., Liang G., Yu D.
Plant Cell Environ. 2020 43(1) 261-274
Oryza sativa POSITIVE REGULATOR OF IRON DEFICIENCY RESPONSE 2 (OsPRI2) and OsPRI3 are involved in the maintenance of Fe homeostasis.
|
|
Wei K., Chen H.
BMC Plant Biol. 2018 18(1) 309
Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat.
|
|
Zhang H., Li Y., Yao X., Liang G., Yu D.
Plant Physiol. 2017 175(1) 543-554
POSITIVE REGULATOR OF IRON HOMEOSTASIS1, OsPRI1, Facilitates Iron Homeostasis.
|
|
Kobayashi T.a b, Nakanishi Itai R.c, Nishizawa N.K.b
Rice 2014 7
Iron deficiency responses in rice roots
|
|
Kobayashi T., Naoko K Nishizawa
Annu Rev Plant Biol 2012 63 131-52
Iron uptake, translocation, and regulation in higher plants.
|
|
Wang L., Ying Y., Narsai R., Ye L., Zheng L., Tian J., Whelan J., Shou H.
Plant Cell Environ. 2012 36(1) 224-36.
Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa.
|
|
Zheng L,Ying Y,Wang L,Wang F,Whelan J,Shou H
BMC Plant Biol 2010 10 166
Identification of a novel iron regulated basic helix-loop-helix protein involved in Fe homeostasis in Oryza sativa.
|
|
Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006 141(4) 1167-84
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
cellular response to iron ion starvation( GO:0010106 )
iron ion homeostasis( GO:0055072 )
DNA binding( GO:0003677 )
|
|
Trait Ontology
|
iron sensitivity( TO:0000224 )
|
|
Plant Ontology
|
shoot system( PO:0009006 )
root( PO:0009005 )
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Jan 19, 2022
|
Update info.