Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol IDI4
Gene Symbol Synonym OsIDI4
CGSNL Gene Name IRON-DEFICIENCY-INDUCED PROTEIN 4
Gene Name Synonym Aminotransferase OsIDI4, Fe-deficiency-induced protein 4
Protein Name IRON-DEFICIENCY-INDUCED PROTEIN 4
Allele
Chromosome No. 9
Explanation AU164691. Putative aminotransferase catalyzing the synthesis of methionine. Asparate/tyrosine/aromatic aminotransferase. GO:1990641: response to iron ion starvation.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK120288
MSU ID LOC_Os09g28050.1
LOC_Os09g28050.2
LOC_Os09g28050.3
RAP ID Os09g0453800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Liang G., Zhang H., Li Y., Pu M., Yang Y., Li C., Lu C., Xu P., Yu D.
J Integr Plant Biol 2020  62(5)  668-689
Oryza sativa FER-LIKE FE DEFICIENCY-INDUCED TRANSCRIPTION FACTOR (OsFIT/OsbHLH156) interacts with OsIRO2 to regulate iron homeostasis.
Wang L., Ying Y., Narsai R., Ye L., Zheng L., Tian J., Whelan J., Shou H.
Plant Cell Environ. 2012  36(1)  224-36.
Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa.
Kobayashi T., Naoko K Nishizawa
Annu Rev Plant Biol 2012  63  131-52
Iron uptake, translocation, and regulation in higher plants.
Suzuki,M., Takahashi,M., Tsukamoto,T., Watanabe,S., Matsuhashi,S., Yazaki,J., Kishimoto,N., Kikuchi,S., Nakanishi,H., Mori,S. and Nishizawa,N.K.
Plant J. 2006  48(1)  85-97
Biosynthesis and secretion of mugineic acid family phytosiderophores in zinc-deficient barley
Kobayashi,T., Suzuki,M., Inoue,H., Itai,R.N., Takahashi,M., Nakanishi,H., Mori,S. and Nishizawa,N.K.
J. Exp. Bot. 2005  56  1305-1316
Expression of iron-acquisition-related genes in iron-deficient rice is co-ordinately induced by partially conserved iron-deficiency-responsive elements
DB Reference
Gramene ID -
Ontologies
Gene Ontology transaminase activity( GO:0008483 )
biosynthetic process( GO:0009058 )
lyase activity( GO:0016829 )
pyridoxal phosphate binding( GO:0030170 )
cellular response to iron ion starvation( GO:0010106 )
cellular response to zinc ion starvation( GO:0034224 )
methionine salvage( GO:0019509 )
response to starvation( GO:0042594 )
Trait Ontology iron sensitivity( TO:0000224 )
zinc sensitivity( TO:0000351 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Sep 17, 2020

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