Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol CRY2
Gene Symbol Synonym OsCRY2
CGSNL Gene Name CRYPTOCHROME 2
Gene Name Synonym cryptochrome 2
Protein Name CRYPTOCHROME 2
Allele Oscry2-1
Chromosome No. 2
Explanation AB103094.
Trait Class Vegetative organ - Leaf
Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
Reproductive organ - Spikelet, flower, glume, awn
Expression
Sequence/Locus
cDNA Accession No. AK065669
MSU ID LOC_Os02g41550.1
LOC_Os02g41550.2
LOC_Os02g41550.3
LOC_Os02g41550.4
RAP ID Os02g0625000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM) 101.2
Link map Classical linkage map
References
Lee S.J., Kim Y., Kang K., Yoon H., Kang J., Cho S.H., Paek N.C.
Plant Cell Environ. 2024  47(12)  4498-4515
rice CRYPTOCHROME-INTERACTING BASIC HELIX-LOOP-HELIX 1-LIKE interacts with OsCRY2 and promotes flowering by upregulating Early heading date 1.
Han S., Liu Y., Bao A., Zeng H., Huang G., Geng M., Zhang C., Zhang Q., Lu J., Wu M., Guo L.
J. Plant Physiol. 2023  280  153904
OsCSN1 regulates the growth of rice seedlings through the GA signaling pathway in blue light.
Li C., Wang X., Zhang L., Zhang C., Yu C., Zhao T., Liu B., Li H., Liu J.
Int J Mol Sci 2021  23(1) 
OsBIC1 Directly Interacts with OsCRYs to Regulate leaf sheath Length through Mediating GA-Responsive Pathway.
Fang C., Chen W., Li C., Jian X., Li Y., Lin H., Lin W.
Sci Rep 2016  6  34569
Methyl-CpG binding domain protein acts to regulate the repair of cyclobutane pyrimidine dimers on rice DNA.
Zhang Q.J., Zhu T., Xia E.H., Shi C., Liu Y.L., Zhang Y., Liu Y., Jiang W.K., Zhao Y.J., Mao S.Y., Zhang L.P., Huang H., Jiao J.Y., Xu P.Z., Yao Q.Y., Zeng F.C., Yang L.L., Gao J., Tao D.Y., Wang Y.J., Bennetzen J.L., Gao L.Z.
Proc. Natl. Acad. Sci. U.S.A. 2014   
Rapid diversification of five Oryza AA genomes associated with rice adaptation.
Hirose F., Inagaki N., Takano M.
Plant Signal Behav 2013  8(3) 
Differences and similarities in the photoregulation of gibberellin metabolism between rice and dicots.
Hirose F., Inagaki N., Hanada A., Yamaguchi S., Kamiya Y., Miyao A., Hirochika H., Takano M.
Plant Cell Physiol. 2012  53(9)  1570-82
Cryptochrome and Phytochrome Cooperatively but Independently Reduce Active Gibberellin Content in Rice Seedlings under Light Irradiation.
Hirose,F., Shinomura,T., Tanabata,T., Shimada,H. and Takano,M.
Plant Cell Physiol. 2006  47(7)  915-925
Involvement of Rice Cryptochromes in De-etiolation Responses and Flowering.
DB Reference
Gramene ID -
Ontologies
Gene Ontology positive regulation of long-day photoperiodism, flowering( GO:0048578 )
positive regulation of short-day photoperiodism, flowering( GO:0048576 )
photoperiodism, flowering( GO:0048573 )
response to blue light( GO:0009637 )
gibberellic acid mediated signaling( GO:0009740 )
regulation of unidimensional cell growth( GO:0051510 )
blue light signaling pathway( GO:0009785 )
DNA photolyase activity( GO:0003913 )
DNA repair( GO:0006281 )
photoperiodism( GO:0009648 )
flower development( GO:0009908 )
photoreceptor activity( GO:0009881 )
response to UV-B( GO:0010224 )
Trait Ontology UV-B light sensitivity( TO:0000601 )
blue light sensitivity( TO:0000159 )
leaf sheath length( TO:0002689 )
gibberellic acid content( TO:0002675 )
days to heading( TO:0000137 )
flowering time( TO:0002616 )
Plant Ontology flower development stage( PO:0007615 )
Related Strains
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Phenotype images
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Last updated
Jan 16, 2025

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