Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol MT2A
Gene Symbol Synonym OsMT2a, MT2a, met6, Osmet6, OsMT-2, MT-2, rgMT-2, OsMT-I-2a, OsMT2-1, MT-I-2a, MT2-1
CGSNL Gene Name METALLOTHIONEIN 2A
Gene Name Synonym Metallothionein 2a, type 2 metallothionein a, metallothionein 6, metallothionein-like gene-2, MT-like gene-2
Protein Name METALLOTHIONEIN 2A
Allele
Chromosome No. 1
Explanation LOC_Os01g05650. P94029. D89931. U43530. D15602. AB175913-AB175925 (O. rufipogon).OsMT2a in Wong et al. 2004, Kumar et al. 2012. OsMT-I-2a in Zhou et al. 2006. met6 in Miyashita et al. 2005.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK243576
MSU ID LOC_Os01g05650.1
RAP ID Os01g0149800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Yamauchi T., Fukazawa A., Nakazono M.
Plant Signal Behav 2017  12(11)  e1388976
METALLOTHIONEIN genes encoding ROS scavenging enzymes are down-regulated in the root cortex during inducible aerenchyma formation in rice.
Kumar G., Kushwaha H.R., Panjabi-Sabharwal V., Kumari S., Joshi R., Karan R., Mittal S., Singla-Pareek SL., Pareek A.
BMC Plant Biol. 2012  12(1)  107
Clustered metallothionein genes are co-regulated in rice and ectopic expression of OsMT1e-P confers multiple abiotic stress tolerance in tobacco via ROS scavenging.
Zhou G,Xu Y,Li J,Yang L,Liu JY
J. Biochem. Mol. Biol. 2006  39  595-606
Molecular analyses of the metallothionein gene family in rice (Oryza sativa L.).
Miyashita,N.T., Yoshida,K. and Ishii,T.
Genes Genet. Syst. 2005  80(3)  173-183
DNA variation in the metallothionein genes in wild rice Oryza rufipogon: Relationship between DNA sequence polymorphism, codon bias and gene expression.
Wong HL, Sakamoto T, Kawasaki T, Umemura K, Shimamoto K.
Plant Physiol. 2004  135(3)  1447-1456
Down-regulation of metallothionein, a reactive oxygen scavenger, by the small GTPase OsRac1 in rice.
Chen,W.M., Hsieh,H.M. and Huang,P.C.
DNA Seq. 1998  8(4)  223-228
Type 2 rice metallothionein-like gene has two introns.
Hsieh,H.M., Liu,W.K., Chang,A. and Huang,P.C.
Plant Mol. Biol. 1996  32(3)  525-529
RNA expression patterns of a type 2 metallothionein-like gene from rice.
Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994  6(4)  615-624
Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
DB Reference
Gramene ID -
Ontologies
Gene Ontology copper ion binding( GO:0005507 )
response to stress( GO:0006950 )
Trait Ontology -
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Feb 27, 2018

/rice/oryzabase