Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol FBOX516
Gene Symbol Synonym OsFbx352, OsFbox516, Fbx352, Fbox516, Os_F0046, OsFBX352, FBX352
CGSNL Gene Name F-BOX PROTEIN 516
Gene Name Synonym F-box gene 352, F-box domain protein 352, F-box protein 516, F-box-type E3 ubiquitin ligase X352
Protein Name F-BOX PROTEIN 516
Allele
Chromosome No. 10
Explanation OsFbx352 in Song et al. 2012, Li et al. 2024. Os_F0046 in Hua et al. 2011.
Trait Class Seed - Physiological traits - Longevity
Tolerance and resistance - Stress tolerance
Character as QTL - Grain quality
Other
Expression
Sequence/Locus
cDNA Accession No. AK104771
MSU ID LOC_Os10g03850.1
LOC_Os10g03850.2
LOC_Os10g03850.3
LOC_Os10g03850.4
LOC_Os10g03850.5
RAP ID Os10g0127900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Li F., Ye H., Wang Y., Zhou J., Zhang G., Liu X., Lu X., Wang F., Chen Q., Chen G., Xiao Y., Tang W., Deng H.
Plants (Basel) 2024  13(7) 
Transcriptomic Profiling of Two Rice Thermo-Sensitive Genic Male Sterile Lines with Contrasting Seed Storability after Artificial Accelerated Aging Treatment.
Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022  23(1)  154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
Huang K., Wu T., Ma Z., Li Z., Chen H., Zhang M., Bian M., Bai H., Jiang W., Du X.
Int J Mol Sci 2021  22(9) 
Rice Transcription Factor OsWRKY55 Is Involved in the Drought Response and Regulation of Plant Growth.
Song S., Dai X., Zhang W.H.
J. Exp. Bot. 2012  63(15)  5559-68
A rice F-box gene, OsFbx352, is involved in glucose-delayed seed germination in rice.
Hua Z., Zou C., Shin-Han Shiu, Richard D Vierstra
PLoS ONE 2011  6(1)  e16219
Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift.
Xu G., Ma H., Nei M., Kong H.
Proc. Natl. Acad. Sci. U.S.A. 2009  106(3)  835-40
Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification.
Yang X., Udaya C Kalluri, Jawdy S., Lee E Gunter, Yin T., Timothy J Tschaplinski, David J Weston, Ranjan P., Gerald A Tuskan
Plant Physiol. 2008  148(3)  1189-200
The F-box gene family is expanded in herbaceous annual plants relative to woody perennial plants.
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP.
Plant Physiol. 2007  143(4)  1467-1483
F-Box Proteins in Rice. Genome-Wide Analysis, Classification, Temporal and Spatial Gene Expression during Panicle and Seed Development, and Regulation by Light and Abiotic Stress.
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to heat( GO:0009408 )
response to humidity( GO:0009270 )
Trait Ontology heat tolerance( TO:0000259 )
humidity related trait( TO:0000441 )
seed viability( TO:0000345 )
seed longevity( TO:0000435 )
vigor related trait( TO:0000250 )
percent germination( TO:0010001 )
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Sep 12, 2024

/rice/oryzabase