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Basic Information
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CGSNL Gene Symbol
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ILI3
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Gene Symbol Synonym
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OsILI3, OsbHLH153, bHLH153, OsBUL2, BUL2
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CGSNL Gene Name
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INCREASED LEAF INCLINATION 3
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Gene Name Synonym
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Increased Leaf Inclination3, basic helix-loop-helix protein 153, BRASSINOSTEROID UPREGULATED 1-LIKE2, BRASSINOSTEROID UPREGULATED 1-LIKE 2
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Protein Name
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Allele
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ili3
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Chromosome No.
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3
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Explanation
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Q10R47. miR172b-target. TO:0000893: stem shape. TO:0000975: grain width. TO:0000919: grain weight.
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Trait Class
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Vegetative organ - Leaf
Vegetative organ - Culm
Reproductive organ - Pollination, fertilization, fertility
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Character as QTL - Plant growth activity
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK241674
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MSU ID
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LOC_Os03g07540.1
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RAP ID
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Os03g0171700
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Liu M., Lu M., Zhao Z., Luo Q., Liu F., Zhao J., He Y., Tian Y., Zhan H.
Plant Physiol. 2024 194(3) 1545-1562
Rice ILI atypical bHLH transcription factors antagonize OsbHLH157/OsbHLH158 during brassinosteroid signaling.
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Panigrahy M., Panigrahi K.C.S., Poli Y., Ranga A., Majeed N.
Biology (Basel) 2022 11(5)
Integrated Expression Analysis of Small RNA, Degradome and Microarray Reveals Complex Regulatory Action of miRNA during Prolonged Shade in Swarnaprabha Rice.
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Dong H., Zhao H., Li S., Han Z., Hu G., Liu C., Yang G., Wang G., Xie W., Xing Y.
PLoS Genet. 2018 14(4) e1007323
Genome-wide association studies reveal that members of bHLH subfamily 16 share a conserved function in regulating flag leaf angle in rice (Oryza sativa).
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Jang S., An G., Li H.Y.
Plant Physiol. 2017 173(1) 688-702
Rice Leaf Angle and grain size.Are Affected by the OsBUL1 Transcriptional Activator Complex.
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Zhang LY,Bai MY,Wu J,Zhu JY,Wang H,Zhang Z,Wang W,Sun Y,Zhao J,Sun X,Yang H,Xu Y,Kim SH,Fujioka S,Lin WH,Chong K,Lu T,Wang ZY
Plant Cell 2009 21(12) 3767-80
Antagonistic HLH/bHLH Transcription Factors Mediate Brassinosteroid Regulation of Cell Elongation and Plant Development in Rice and Arabidopsis.
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Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006 141(4) 1167-84
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to gibberellin stimulus( GO:0009739 )
response to brassinosteroid stimulus( GO:0009741 )
response to auxin stimulus( GO:0009733 )
regulation of transcription, DNA-dependent( GO:0006355 )
regulation of growth( GO:0040008 )
protein dimerization activity( GO:0046983 )
response to light intensity( GO:0009642 )
brassinosteroid mediated signaling( GO:0009742 )
nucleus( GO:0005634 )
cytoplasm( GO:0005737 )
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Trait Ontology
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leaf angle( TO:0000206 )
auxin sensitivity( TO:0000163 )
brassinosteroid sensitivity( TO:0002677 )
gibberellic acid sensitivity( TO:0000166 )
light intensity sensitivity( TO:0000460 )
flag leaf angle( TO:0000124 )
leaf development trait( TO:0000655 )
growth and development trait( TO:0000357 )
sterility related trait( TO:0000485 )
stem anatomy and morphology trait( TO:0000361 )
plant height( TO:0000207 )
internode length( TO:0000145 )
grain length( TO:0000734 )
grain width( TO:0000402 )
grain weight( TO:0000590 )
leaf shape( TO:0000492 )
leaf color( TO:0000326 )
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Plant Ontology
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-
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Feb 19, 2026
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Update info.