|
Basic Information
|
|
CGSNL Gene Symbol
|
ILI1
|
|
Gene Symbol Synonym
|
OsbHLH154, bHLH154, OsILI1
|
|
CGSNL Gene Name
|
INCREASED LEAF INCLINATION 1
|
|
Gene Name Synonym
|
Increased Leaf Inclination1, INCREASED LEAF INCLINATION 1, basic helix-loop-helix protein 154
|
|
Protein Name
|
BASIC HELIX-LOOP-HELIX PROTEIN 154
|
|
Allele
|
ili1-D, ili1
|
|
Chromosome No.
|
4
|
|
Explanation
|
TO:0000893: stem shape. TO:0000975: grain width. TO:0000919: grain weight.
|
|
Trait Class
|
Vegetative organ - Leaf
Vegetative organ - Culm
Reproductive organ - Pollination, fertilization, fertility
Seed - Morphological traits
Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Character as QTL - Plant growth activity
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
-
|
|
MSU ID
|
LOC_Os04g54900.1
|
|
RAP ID
|
Os04g0641700
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Liu M., Lu M., Zhao Z., Luo Q., Liu F., Zhao J., He Y., Tian Y., Zhan H.
Plant Physiol. 2024 194(3) 1545-1562
Rice ILI atypical bHLH transcription factors antagonize OsbHLH157/OsbHLH158 during brassinosteroid signaling.
|
|
Song Y., Niu R., Yu H., Guo J., Du C., Zhang Z., Wei Y., Li J., Zhang S.
Plant J. 2022 110(4) 1111-1127
OsSLA1 functions in leaf angle regulation by enhancing the interaction between OsBRI1 and OsBAK1 in rice.
|
|
Tian Q., Luan J., Guo C., Shi X., Deng P., Zhou Z., Zhang W., Shen L.
Biochem. Biophys. Res. Commun. 2021 578 129-135
A bHLH protein, OsBIM1, positively regulates rice leaf angle by promoting brassinosteroid signaling.
|
|
Zhang J., Gao X., Cai G., Wang Y., Li J., Du H., Wang R., Zhang H., Huang J.
Rice (N Y) 2021 14(1) 105
An adenylate kinase OsAK3 Involves Brassinosteroid Signaling and Grain Length in Rice (Oryza sativa L.).
|
|
Zhu C.L., Xing B., Teng S.Z., Deng C., Shen Z.Y., Ai P.F., Lu T.G., Zhang S.W., Zhang Z.G.
Front Plant Sci 2021 12 760041
OsRELA Regulates Leaf Inclination by Repressing the Transcriptional Activity of OsLIC in Rice.
|
|
Seo H., Kim S.H., Lee B.D., Lim J.H., Lee S.J., An G., Paek N.C.
Int J Mol Sci 2020 21(6)
The Rice <i>Basic Helix-Loop-Helix 79</i> (<i>OsbHLH079</i>) Determines leaf angle and Grain Shape.
|
|
Liu S., Hua L., Dong S., Chen H., Zhu X., Jiang J., Zhang F., Li Y., Fang X., Chen F.
Plant J. 2015
OsMAPK6, a mitogen-activated protein kinase, influences rice grain size and biomass production.
|
|
Zhang C., Bai M.Y., Chong K.
Plant Cell Rep. 2014 33(5) 683-96
Brassinosteroid-mediated regulation of agronomic traits in rice.
|
|
Zhang C., Xu Y., Guo S., Zhu J., Huan Q., Liu H., Wang L., Luo G., Wang X., Chong K.
PLoS Genet. 2012 8(4) e1002686
Dynamics of brassinosteroid response modulated by negative regulator LIC in rice.
|
|
Zhang LY,Bai MY,Wu J,Zhu JY,Wang H,Zhang Z,Wang W,Sun Y,Zhao J,Sun X,Yang H,Xu Y,Kim SH,Fujioka S,Lin WH,Chong K,Lu T,Wang ZY
Plant Cell 2009 21(12) 3767-80
Antagonistic HLH/bHLH Transcription Factors Mediate Brassinosteroid Regulation of Cell Elongation and Plant Development in Rice and Arabidopsis.
|
|
Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006 141(4) 1167-84
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
regulation of timing of transition from vegetative to reproductive phase( GO:0048510 )
embryonic root morphogenesis( GO:0010086 )
unidimensional cell growth( GO:0009826 )
vacuole( GO:0005773 )
photomorphogenesis( GO:0009640 )
brassinosteroid mediated signaling( GO:0009742 )
cytoplasm( GO:0005737 )
nucleus( GO:0005634 )
response to brassinosteroid stimulus( GO:0009741 )
|
|
Trait Ontology
|
brassinosteroid sensitivity( TO:0002677 )
leaf lamina joint bending( TO:0002688 )
grain size( TO:0000397 )
leaf angle( TO:0000206 )
sterility related trait( TO:0000485 )
plant height( TO:0000207 )
stem anatomy and morphology trait( TO:0000361 )
internode length( TO:0000145 )
grain length( TO:0000734 )
grain width( TO:0000402 )
grain weight( TO:0000590 )
leaf shape( TO:0000492 )
leaf color( TO:0000326 )
growth and development trait( TO:0000357 )
|
|
Plant Ontology
|
-
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Feb 19, 2026
|
Update info.