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Basic Information
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CGSNL Gene Symbol
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COI1
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Gene Symbol Synonym
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OsCOI1a, OsCOI1, Os_F0728, COI1a, F0728, OsFBL4, FBL4
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CGSNL Gene Name
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CORONATINE INSENSITIVE 1
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Gene Name Synonym
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coronatine insensitive 1a, CORONATINE INSENSITIVE1, coronatine insensitive 1, F-box-type E3 ubiquitin ligase L4
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Protein Name
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Allele
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oscoi1a, coi1a, coi1a-2
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Chromosome No.
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1
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Explanation
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AY168645. DQ028826. a component of the SCF E3 ubiquitin ligase complex. an F-box protein. The result of the pull-down assay showed that JA-Ile bound to OsCOI1a-OsJAZ3/4/6 co-receptor pairs (Okumura et al. 2023). TO:0020068: beta-glucan content. GO:2000762: regulation of phenylpropanoid metabolic process. TO:0000975: grain width.
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Trait Class
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Coloration - Chlorophyll
Seed - Morphological traits - Grain shape
Tolerance and resistance - Disease resistance
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
Reproductive organ - Spikelet, flower, glume, awn
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK121543
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MSU ID
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LOC_Os01g63420.1
LOC_Os01g63420.2
LOC_Os01g63420.3
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RAP ID
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Os01g0853400
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Cheaib M., Nguyen H.T., Couderc M., Serret J., Soriano A., Larmande P., Richter C., Junker B.H., Raorane M.L., Petitot A.S., Champion A.
PLoS ONE 2024 19(10) e0311136
Transcriptomic and metabolomic reveal OsCOI2 as the jasmonate-receptor master switch in rice root.
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Dong K., Wu F., Cheng S., Li S., Zhang F., Xing X., Jin X., Luo S., Feng M., Miao R., Chang Y., Zhang S., You X., Wang P., Zhang X., Lei C., Ren Y., Zhu S., Guo X., Wu C., Yang D.L., Lin Q., Cheng Z., Wan J.
Mol Plant 2024 17(6) 900-919
OsPRMT6a-mediated arginine methylation of OsJAZ1 regulates jasmonate signaling and spikelet development in rice.
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Wang X., Chen Y., Liu S., Fu W., Zhuang Y., Xu J., Lou Y., Baldwin I.T., Li R.
New Phytol. 2023 238(5) 2144-2158
Functional dissection of rice jasmonate receptors involved in development and defense.
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Okumura T., Kitajima T., Kaji T., Urano H., Matsumoto K., Inagaki H., Miyamoto K., Okada K., Ueda M.
Biosci. Biotechnol. Biochem. 2023 87(10) 1122-1128
Difference in the ligand affinity among redundant plant hormone receptors of rice OsCOI1a/1b/2-OsJAZs.
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Dai Y.S., Liu D., Guo W., Liu Z.X., Zhang X., Shi L.L., Zhou D.M., Wang L.N., Kang K., Wang F.Z., Zhao S.S., Tan Y.F., Hu T., Chen W., Li P., Zhou Q.M., Yuan L.Y., Zhang Z., Chen Y.Q., Zhang W.Q., Li J., Yu L.J., Xiao S.
Plant Biotechnol. J. 2023 21(6) 1286-1300
Poaceae-specific β-1,3;1,4-d-glucans link jasmonate signalling to OsLecRK1-mediated defence response during rice-brown planthopper interactions.
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Tong L., Wu W., Lin Y., Chen D., Zeng R., Lu L., Song Y.
Plants (Basel) 2023 12(5)
Insect Herbivory on Main Stem Enhances Induced Defense of Primary Tillers in Rice (<i>Oryza sativa</i> L.).
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Gao Y., Xiang X., Zhang Y., Cao Y., Wang B., Zhang Y., Wang C., Jiang M., Duan W., Chen D., Zhan X., Cheng S., Liu Q., Cao L.
Int J Mol Sci 2022 23(2)
Disruption of <i>OsPHD1</i>, Encoding a UDP-glucose epimerase, Causes JA Accumulation and Enhanced Bacterial Blight Resistance in Rice.
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Li P., Jiang J., Zhang G., Miao S., Lu J., Qian Y., Zhao X., Wang W., Qiu X., Zhang F., Xu J.
Front Plant Sci 2022 13 1102938
Integrating GWAS and transcriptomics to identify candidate genes conferring heat tolerance in rice.
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Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022 23(1) 154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
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Qiu J., Xie J., Chen Y., Shen Z., Shi H., Naqvi N.I., Qian Q., Liang Y., Kou Y.
Mol Plant 2022 15(4) 723-739
Warm temperature compromises JA-regulated basal resistance to enhance Magnaporthe oryzae infection in rice.
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Wang D., Wang H., Liu Q., Tu R., Zhou X., Zhang Y., Wu W., Yu P., Chen D., Zhan X., Cao L., Cheng S., Shen X.
Plant Cell Rep. 2021 40(5) 835-850
Reduction of OsMPK6 activity by a R89K mutation induces cell death and bacterial blight resistance in rice.
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Lim C., Kang K., Shim Y., Sakuraba Y., An G., Paek N.C.
Front Plant Sci 2020 11 1096
Rice ETHYLENE RESPONSE FACTOR 101 Promotes leaf senescence Through Jasmonic Acid-Mediated Regulation of <i>OsNAP</i> and <i>OsMYC2</i>.
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Feng X., Zhang L., Wei X., Zhou Y., Dai Y., Zhu Z.
Int J Mol Sci 2020 21(12)
OsJAZ13 Negatively Regulates Jasmonate Signaling and Activates Hypersensitive Cell Death Response in Rice.
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Dai Z., Tan J., Zhou C., Yang X., Yang F., Zhang S., Sun S., Miao X., Shi Z.
Plant Biotechnol. J. 2019
The OsmiR396-OsGRF8-OsF3H-flavonoid pathway mediates resistance to the brown planthopper in rice (Oryza sativa).
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Lin Y., Sun Z., Li Z., Xue R., Cui W., Sun S., Liu T., Zeng R., Song Y.
Front Plant Sci 2019 10 652
Deficiency in Silicon Transporter Lsi1 Compromises Inducibility of Anti-herbivore Defense in Rice Plants.
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Yan J., Yao R., Chen L., Li S., Gu M., Nan F., Xie D.
Mol Plant 2018 11(10) 1237-1247
Dynamic Perception of Jasmonates by the F-Box Protein COI1.
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Chen Y., Ma J., Anthony J Miller, Luo B., Wang M., Zhu Z., Pieter B F Ouwerkerk
Plant Cell Physiol. 2016 57(7) 1530-1543
OsCHX14 is Involved in the K+ Homeostasis in Rice (Oryza sativa) Flowers.
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He Y., Zhang H., Sun Z., Li J., Hong G., Zhu Q., Zhou X., MacFarlane S., Yan F., Chen J.
New Phytol. 2016
Jasmonic acid-mediated defense suppresses brassinosteroid-mediated susceptibility to Rice black streaked dwarf virus infection in rice.
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X Xue, Z X Cao, X T Zhang, Y Wang, Y F Zhang, Z X Chen, X B Pan, S M Zuo
Plant Dis. 2016 100(8) 1634-1642
Overexpression of OsOSM1 Enhances Resistance to Rice Sheath Blight.
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Lee S.H., Sakuraba Y., Lee T., Kim K.W., An G., Lee H.Y., Paek N.C.
J Integr Plant Biol 2014
Mutation of Oryza sativa CORONATINE INSENSITIVE 1b (OsCOI1b) delays leaf senescence.
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Lee H.Y., Seo J.S., Cho J.H., Jung H., Kim J.K., Lee J.S., Rhee S., Do Choi Y.
PLoS ONE 2013 8(1) e52802
Oryza sativa COI homologues restore jasmonate signal transduction in Arabidopsis COI1-1 mutants.
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Ye M., Song Y., Long J., Wang R., Baerson S.R., Pan Z., Zhu-Salzman K., Xie J., Cai K., Luo S., Zeng R.
Proc. Natl. Acad. Sci. U.S.A. 2013 110(38) E3631-9
Priming of jasmonate-mediated antiherbivore defense responses in rice by silicon.
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Yang D.L., Yang Y., He Z.
Mol Plant 2013 6(3) 675-85
Role of plant hormones and their cross-talks in rice immunity.
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Yamada S., Kano A., Tamaoki D., Miyamoto A., Shishido H., Miyoshi S., Taniguchi S., Akimitsu K., Gomi K.
Plant Cell Physiol. 2012 53(12) 2060-72
Involvement of OsJAZ8 in jasmonate-induced resistance to bacterial blight in rice.
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Ye M., Luo S.M., Xie J.F., Li Y.F., Xu T., Liu Y., Song Y.Y., Zhu-Salzman K., Zeng R.S.
PLoS ONE 2012 7(4) e36214
silencing COI1 in rice increases susceptibility to chewing insects and impairs inducible defense.
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Yang D.L., Yao J., Mei C.S., Tong X.H., Zeng L.J., Li Q., Xiao L.T., Sun T.P., Li J., Deng X.W., Lee C.M., Thomashow M.F., Yang Y., He Z., He S.Y.
Proc. Natl. Acad. Sci. U.S.A. 2012 109(19) E1192-200
Plant hormone jasmonate prioritizes defense over growth by interfering with gibberellin signaling cascade.
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Seo J.S. , Joo J. , Kim M.J. , Kim Y.K. , Nahm B.H. , Song S.I. , Cheong J.J. , Lee J.S. , Kim J.K. , Choi Y.D.
Plant J. 2011 65(6) 907-21
OsbHLH148, a basic helix-loop-helix protein, interacts with OsJAZ proteins in a jasmonate signaling pathway leading to drought tolerance in rice.
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Hua Z., Zou C., Shin-Han Shiu, Richard D Vierstra
PLoS ONE 2011 6(1) e16219
Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift.
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Xu G., Ma H., Nei M., Kong H.
Proc. Natl. Acad. Sci. U.S.A. 2009 106(3) 835-40
Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification.
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Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP.
Plant Physiol. 2007 143(4) 1467-1483
F-Box Proteins in Rice. Genome-Wide Analysis, Classification, Temporal and Spatial Gene Expression during Panicle and Seed Development, and Regulation by Light and Abiotic Stress.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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leaf senescence( GO:0010150 )
response to herbivore( GO:0080027 )
defense response to insect( GO:0002213 )
stomatal movement( GO:0010118 )
response to far red light( GO:0010218 )
SCF ubiquitin ligase complex( GO:0019005 )
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process( GO:0031146 )
response to wounding( GO:0009611 )
shade avoidance( GO:0009641 )
defense response to virus( GO:0051607 )
detection of jasmonic acid stimulus( GO:0009754 )
defense response to fungus( GO:0050832 )
jasmonic acid mediated signaling pathway( GO:0009867 )
regulation of flower development( GO:0009909 )
negative regulation of defense response( GO:0031348 )
defense response to bacterium( GO:0042742 )
response to insect( GO:0009625 )
response to heat( GO:0009408 )
response to jasmonic acid stimulus( GO:0009753 )
phenylpropanoid metabolic process( GO:0009698 )
nucleus( GO:0005634 )
inflorescence development( GO:0010229 )
protein ubiquitination( GO:0016567 )
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Trait Ontology
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leaf senescence( TO:0000249 )
bacterial blight disease resistance( TO:0000175 )
jasmonic acid sensitivity( TO:0000172 )
blast disease( TO:0000074 )
silicon sensitivity( TO:0000031 )
brown planthopper resistance( TO:0000424 )
black streak dwarf virus resistance( TO:0000020 )
insect damage resistance( TO:0000261 )
heat tolerance( TO:0000259 )
leaf-folder resistance( TO:0000403 )
polysaccharide content( TO:0006007 )
inflorescence development trait( TO:0000621 )
seed size( TO:0000391 )
chlorophyll content( TO:0000495 )
grain length( TO:0000734 )
grain width( TO:0000402 )
1000-seed weight( TO:0000382 )
grain size( TO:0000397 )
spikelet anatomy and morphology trait( TO:0000657 )
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Plant Ontology
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inflorescence development stage( PO:0001083 )
whole plant( PO:0000003 )
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Related Strains
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Phenotype images
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Last updated
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Mar 3, 2026
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Update info.