|
Basic Information
|
|
CGSNL Gene Symbol
|
BHLH6
|
|
Gene Symbol Synonym
|
OsbHLH006, bHLH006, OsbHLH6, bHLH6, RERJ1, OsRERJ1, bHLH35
|
|
CGSNL Gene Name
|
BASIC HELIX-LOOP-HELIX PROTEIN 6
|
|
Gene Name Synonym
|
basic helix-loop-helix protein 006, Transcription factor bHLH35
|
|
Protein Name
|
BASIC HELIX-LOOP-HELIX PROTEIN 6
|
|
Allele
|
bhlh6, bhlh6-1, bhlh6-2, Osbhlh6, Osbhlh6#1, Osbhlh6#2
|
|
Chromosome No.
|
4
|
|
Explanation
|
AB040744. BF889463. bHLH35 in Sim et al. 2018. TO:0020102: phosphate content. TO:0001051: root hair density. GO:2000022: regulation of jasmonic acid mediated signaling pathway. GO:2000031: regulation of salicylic acid mediated signaling pathway. GO:1900150: regulation of defense response to fungus. GO:1903840: response to arsenite(3-). GO:0098869: cellular oxidant detoxification. GO:2000377: regulation of reactive oxygen species metabolic process. TO:0006054: arsenic content trait. TO:1000026: root system arsenic content. TO:1000052: shoot system arsenic content.
|
|
Trait Class
|
Tolerance and resistance - Stress tolerance
Vegetative organ - Culm
Vegetative organ - Root
Tolerance and resistance - Disease resistance
Tolerance and resistance - Insect resistance
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK242210
|
|
MSU ID
|
LOC_Os04g23550.1
LOC_Os04g23550.2
|
|
RAP ID
|
Os04g0301500
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Wang X., Diao Z., Cao C., Liu Y., Xia N., Zhang Y., Lu L., Kong F., Zhou H., Chen L., Zhang J., Wang B., Huang R., Tang D., Li S.
J Integr Plant Biol 2024
The receptor-like cytoplasmic kinase OsBSK1-2 regulates immunity via an HLH/bHLH complex.
|
|
Huang M., Liu Y., Bian Q., Zhao W., Zhao J., Liu Q.
Plant J. 2024 120(6) 2485-2499
Osbhlh6, a basic helix-loop-helix transcription factor, confers arsenic tolerance and root-to-shoot translocation in rice.
|
|
Li J., Chen Y., Zhang R., Wang R., Wu B., Zhang H., Xiao G.
Rice (N Y) 2024 17(1) 61
OsWRKY70 Plays Opposite Roles in Blast Resistance and Cold Stress Tolerance in Rice.
|
|
Chen Y., Jin G., Liu M., Wang L., Lou Y., Baldwin I., Li R.
Plant Cell 2024
Multi-omic analyses reveal key sectors of jasmonate-mediated defense responses in rice.
|
|
Zhou Z., Liu J., Meng W., Sun Z., Tan Y., Liu Y., Tan M., Wang B., Yang J.
Plants (Basel) 2023 12(19)
Integrated Analysis of Transcriptome and Metabolome Reveals Molecular Mechanisms of Rice with Different Salinity Tolerances.
|
|
Gao Y., Xiang X., Zhang Y., Cao Y., Wang B., Zhang Y., Wang C., Jiang M., Duan W., Chen D., Zhan X., Cheng S., Liu Q., Cao L.
Int J Mol Sci 2022 23(2)
Disruption of <i>OsPHD1</i>, Encoding a UDP-glucose epimerase, Causes JA Accumulation and Enhanced Bacterial Blight Resistance in Rice.
|
|
Wu T., Zhang H., Bi Y., Yu Y., Liu H., Yang H., Yuan B., Ding X., Chu Z.
Int J Mol Sci 2021 22(24)
Tal2c Activates the Expression of <i>OsF3H04g</i> to Promote Infection as a Redundant TALE of Tal2b in <i>Xanthomonas oryzae</i> pv. <i>oryzicola</i>.
|
|
He Q., Lu H., Guo H., Wang Y., Zhao P., Li Y., Wang F., Xu J., Mo X., Mao C.
Plant J. 2020
OsbHLH6 interacts with OsSPX4 and regulates the phosphate starvation response in rice.
|
|
Meng F., Yang C., Cao J., Chen H., Pang J., Zhao Q., Wang Z., Qing Fu Z., Liu J.
J Integr Plant Biol 2020
A bHLH transcription activator regulates defense signaling by nucleo-cytosolic trafficking in rice.
|
|
Wang J., Zhang Q., Wang Y., Huang J., Luo N., Wei S., Jin J.
Rice (N Y) 2019 12(1) 6
Analysing the rice young panicle transcriptome reveals the gene regulatory network controlled by TRIANGULAR HULL1.
|
|
Sánchez-Sanuy F., Peris-Peris C., Tomiyama S., Okada K., Hsing Y.I., San Segundo B., Campo S.
BMC Plant Biol. 2019 19(1) 563
Osa-miR7695 enhances transcriptional priming in defense responses against the rice blast fungus.
|
|
Sim J.S., Kesawat M.S., Kumar M., Kim S.Y., Mani V., Subramanian P., Park S., Lee C.M., Kim S.R., Hahn B.S.
Int J Mol Sci 2018 19(4)
Lack of the alpha1,3-Fucosyltransferase Gene (<i>OsFucT</i>) Affects Anther Development and pollen Viability in Rice.
|
|
Wei K., Chen H.
BMC Plant Biol. 2018 18(1) 309
Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat.
|
|
Fu J., Wu H., Ma S., Xiang D., Liu R., Xiong L.
Front Plant Sci 2017 8 2108
OsJAZ1 Attenuates Drought Resistance by Regulating JA and ABA Signaling in Rice.
|
|
Miyamoto K., Shimizu T., Mochizuki S., Nishizawa Y., Minami E., Nojiri H., Yamane H., Okada K.
Protoplasma 2013 250(1) 241-9
Stress-induced expression of the transcription factor RERJ1 is tightly regulated in response to jasmonic acid accumulation in rice.
|
|
Shimizu T., Miyamoto K., Miyamoto K., Minami E., Nishizawa Y., Iino M., Nojiri H., Yamane H., Okada K.
Biosci. Biotechnol. Biochem. 2013 77(7) 1556-64
OsJAR1 Contributes Mainly to Biosynthesis of the Stress-Induced Jasmonoyl-Isoleucine Involved in Defense Responses in Rice.
|
|
Kim S.H., Oikawa T., Kyozuka J., Wong H.L., Umemura K., Kishi-Kaboshi M., Takahashi A., Kawano Y., Kawasaki T., Shimamoto K.
Plant Cell Physiol. 2012 53(4) 740-54
The bHLH Rac Immunity1 (RAI1) Is Activated by OsRac1 via OsMAPK3 and OsMAPK6 in Rice Immunity.
|
|
Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006 141(4) 1167-84
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
|
|
Kiribuchi K., Jikumaru Y., Kaku H., Minami E., Hasegawa M., Kodama O., Seto H., Okada K., Nojiri H., Yamane H.
Biosci. Biotechnol. Biochem. 2005 69(5) 1042-4
Involvement of the basic helix-loop-helix transcription factor RERJ1 in wounding and drought stress responses in rice plants.
|
|
Kiribuchi,K., Sugimori,M., Takeda,M., Otani,T., Okada,K., Onodera,H., Ugaki,M., Tanaka,Y., Tomiyama-Akimoto,C., Yamaguchi,T., Minami,E., Shibuya,N., Omori,T., Nishiyama,M., Nojiri,H. and Yamane,H.
Biochem. Biophys. Res. Commun. 2004 325(3) 857-863
RERJ1, a jasmonic acid-responsive gene from rice, encodes a basic helix-loop-helix protein.
|
|
L Xiong, M W Lee, M Qi, Y Yang
Mol. Plant Microbe Interact. 2001 14(5) 685-92
Identification of defense-related rice genes by suppression subtractive hybridization and differential screening.
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
nucleus( GO:0005634 )
response to water deprivation( GO:0009414 )
response to wounding( GO:0009611 )
response to jasmonic acid stimulus( GO:0009753 )
phosphate ion homeostasis( GO:0055062 )
response to starvation( GO:0042594 )
cellular response to phosphate starvation( GO:0016036 )
response to molecule of fungal origin( GO:0002238 )
response to chitin( GO:0010200 )
jasmonic acid mediated signaling pathway( GO:0009867 )
salicylic acid mediated signaling pathway( GO:0009863 )
defense response to fungus( GO:0050832 )
regulation of defense response( GO:0031347 )
cytoplasm( GO:0005737 )
defense response to bacterium( GO:0042742 )
response to salt stress( GO:0009651 )
negative regulation of immune response( GO:0050777 )
response to herbivore( GO:0080027 )
defense response to insect( GO:0002213 )
response to arsenic( GO:0046685 )
positive regulation of transcription, DNA-dependent( GO:0045893 )
response to oxidative stress( GO:0006979 )
phytochelatin biosynthetic process( GO:0046938 )
arsenite transport( GO:0015700 )
vascular transport( GO:0010232 )
|
|
Trait Ontology
|
jasmonic acid sensitivity( TO:0000172 )
drought tolerance( TO:0000276 )
root hair length( TO:0002665 )
root length( TO:0000227 )
stem length( TO:0000576 )
blast disease( TO:0000074 )
plant height( TO:0000207 )
salt tolerance( TO:0006001 )
brown planthopper resistance( TO:0000424 )
relative plant height( TO:0001034 )
relative root length( TO:0000516 )
oxidative stress( TO:0002657 )
hydrogen peroxide content( TO:0000605 )
|
|
Plant Ontology
|
root( PO:0009005 )
shoot system( PO:0009006 )
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Aug 30, 2026
|
Update info.