Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym OsLysM-RLK2, LysM-RLK2, OsLYK5, LYK5, OsNFR5, NFR5, OsMYR1/OsLYK2, OsMYR1, OsLYK2, MYR1, LYK2
CGSNL Gene Name _
Gene Name Synonym LysM receptor-like kinase 2, LysM-type receptor-like kinase5, Nod-Factor Receptor 5, Myc Factor Receptor 1
Protein Name
Allele Osmyr1, Osmyr1-1/Oslyk2-1, Osmyr1-2, Osmyr1-3
Chromosome No. 3
Explanation OsMYR1/OsLYK2 in He et al. 2019. GO:0036377: arbuscular mycorrhizal association.
Trait Class Tolerance and resistance
cDNA Accession No. -
MSU ID LOC_Os03g13080.1
RAP ID Os03g0233300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Choi J., Lee T., Cho J., Servante E.K., Pucker B., Summers W., Bowden S., Rahimi M., An K., An G., Bouwmeester H.J., Wallington E.J., Oldroyd G., Paszkowski U.
Nat Commun 2020  11(1)  2114
The negative regulator SMAX1 controls mycorrhizal symbiosis and strigolactone biosynthesis in rice.
He J., Zhang C., Dai H., Liu H., Zhang X., Yang J., Chen X., Zhu Y., Wang D., Qi X., Li W., Wang Z., An G., Yu N., He Z., Wang Y.F., Xiao Y., Zhang P., Wang E.
Mol Plant 2019  12(12)  1561-1576
A LysM Receptor Heteromer Mediates Perception of Arbuscular Mycorrhizal Symbiotic Signal in Rice.
Shimizu T., Nakano T., Takamizawa D., Desaki Y., Ishii-Minami N., Nishizawa Y., Minami E., Okada K., Yamane H., Kaku H., Shibuya N.
Plant J. 2010  64(2)  204-214
Two LysM receptor molecules, CEBiP and OsCERK1, cooperatively regulate chitin elicitor signaling in rice.
Xue-Cheng Zhang, Wu X., Findley S., Wan J., Libault M., Henry T Nguyen, Steven B Cannon, Stacey G.
Plant Physiol. 2007  144(2)  623-36
Molecular evolution of lysin motif-type receptor-like kinases in plants.
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DB Reference
Gramene ID -
Gene Ontology chitin binding( GO:0008061 )
plasma membrane( GO:0005886 )
cytosolic calcium ion homeostasis( GO:0051480 )
oligosaccharide binding( GO:0070492 )
detection of symbiotic fungus( GO:0009603 )
response to symbiotic fungus( GO:0009610 )
symbiosis, encompassing mutualism through parasitism( GO:0044403 )
Trait Ontology -
Plant Ontology root epidermis( PO:0006036 )
root cortex( PO:0000258 )
Related Strains
Phenotype images
Last updated
Nov 9, 2021