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Basic Information
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CGSNL Gene Symbol
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IAA13
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Gene Symbol Synonym
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OsIAA13, OsIAA1, OsiIAA1
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CGSNL Gene Name
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AUX/IAA PROTEIN 13
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Gene Name Synonym
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Aux/IAA protein 13, Aux/IAA protein 1
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Protein Name
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AUX/IAA PROTEIN 13
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Allele
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Osiaa13, iaa13
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Chromosome No.
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3
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Explanation
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AJ251791. AJ563599. A2XLV9, Q10D34. OsIAA1 in Thakur et al. 2001 and Nakamura et al. 2006.
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Trait Class
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Vegetative organ - Root
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK059838
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MSU ID
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LOC_Os03g53150.1
LOC_Os03g53150.2
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RAP ID
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Os03g0742900
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Asif S., Kim E.G., Jang Y.H., Jan R., Kim N., Asaf S., Lubna, Farooq M., Kim K.M.
Plants (Basel) 2022 11(19)
Identification of the <i>OsCML4</i> Gene in Rice Related to Salt Stress Using QTL Analysis.
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Sharma E., Borah P., Kaur A., Bhatnagar A., Mohapatra T., Kapoor S., Khurana J.P.
Genomics 2021 113(3) 1247-1261
A comprehensive transcriptome analysis of contrasting rice cultivars highlights the role of auxin and ABA responsive genes in heat stress response.
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Yamauchi T., Tanaka A., Inahashi H., Naoko K Nishizawa, Tsutsumi N., Inukai Y., Nakazono M.
Proc. Natl. Acad. Sci. U.S.A. 2019 116(41) 20770-20775
Fine control of aerenchyma and lateral root development through AUX/IAA- and ARF-dependent auxin signaling.
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Shao Y., Zhou H.Z., Wu Y., Zhang H., Lin J., Jiang X., He Q., Zhu J., Li Y., Yu H., Mao C.
Plant Cell 2019 31(6) 1257-1275
OsSPL3, an SBP-Domain Protein, Regulates crown root Development in Rice.
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Phule A.S., Barbadikar K.M., Madhav M.S., Senguttuvel P., Babu MBBP., Ananda Kumar P.
3 Biotech 2018 8(9) 383
Genes encoding membrane proteins showed stable expression in rice under aerobic condition: novel set of reference genes for expression studies.
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Jing H., Yang X., Zhang J., Liu X., Zheng H., Dong G., Nian J., Feng J., Xia B., Qian Q., Li J., Zuo J.
Nat Commun 2015 6 7395
Peptidyl-prolyl isomerization targets rice Aux/IAAs for proteasomal degradation during auxin signalling.
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Kitomi Y., Inahashi H., Takehisa H., Sato Y., Inukai Y.
Plant Sci. 2012 190 116-22
OsIAA13-mediated auxin signaling is involved in lateral root initiation in rice.
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Song Y., Wang L., Xiong L.
Planta 2009 229(3) 577-91
Comprehensive expression profiling analysis of OsIAA gene family in developmental processes and in response to phytohormone and stress treatments.
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Nakamura A,Umemura I,Gomi K,Hasegawa Y,Kitano H,Sazuka T,Matsuoka M
Plant J. 2006 46 297-306
Production and characterization of auxin-insensitive rice by overexpression of a mutagenized rice IAA protein.
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Jain M,Kaur N,Garg R,Thakur JK,Tyagi AK,Khurana JP
Funct Integr Genomics 2006 6 47-59
Structure and expression analysis of early auxin-responsive Aux/IAA gene family in rice (Oryza sativa).
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Thakur,J.K., Jain,M., Tyagi,A.K. and Khurana,J.P.
Biochim. Biophys. Acta 2005 1730(3) 196-205
Exogenous auxin enhances the degradation of a light down-regulated and nuclear-localized OsiIAA1, an Aux/IAA protein from rice, via proteasome.
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David L Remington, Todd J Vision, Thomas J Guilfoyle, Jason W Reed
Plant Physiol. 2004 135(3) 1738-52
Contrasting modes of diversification in the Aux/IAA and ARF gene families.
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Thakur,J.K., Tyagi,A.K. and Khurana,J.P.
DNA Res. 2001 8(5) 193-203
OsIAA1, an Aux/IAA cDNA from rice, and changes in its expression as influenced by auxin and light.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to heat( GO:0009408 )
auxin mediated signaling pathway( GO:0009734 )
regulation of transcription, DNA-dependent( GO:0006355 )
transcription, DNA-dependent( GO:0006351 )
nucleus( GO:0005634 )
response to salt stress( GO:0009651 )
response to water deprivation( GO:0009414 )
response to wounding( GO:0009611 )
gravitropism( GO:0009630 )
response to jasmonic acid stimulus( GO:0009753 )
lateral root morphogenesis( GO:0010102 )
response to anoxia( GO:0034059 )
lateral root formation( GO:0010311 )
aerenchyma formation( GO:0010618 )
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Trait Ontology
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lateral root number( TO:0001013 )
salt tolerance( TO:0006001 )
heat tolerance( TO:0000259 )
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Plant Ontology
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root cortex( PO:0000258 )
root primordium( PO:0005029 )
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Related Strains
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Phenotype images
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Last updated
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Mar 14, 2023
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Update info.